NP-MRD: Showing NP-Card for 5a,6-methano-3a,9b-dimethyl-3,7-dioxo-cyclopentano[ (NP0029144)

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Record Information

Version

2.0

Created at

2021-06-19 20:51:02 UTC

Updated at

2021-06-29 23:56:20 UTC

NP-MRD ID

NP0029144

Secondary Accession Numbers

None

Natural Product Identification

Common Name

5a,6-methano-3a,9b-dimethyl-3,7-dioxo-cyclopentano[

Provided By

JEOL Database JEOL Logo

Description

5a,6-methano-3a,9b-dimethyl-3,7-dioxo-cyclopentano[ is found in Aglaia rubiginosa. 5a,6-methano-3a,9b-dimethyl-3,7-dioxo-cyclopentano[ was first documented in 2000 (Weber, S., et al.). Based on a literature review very few articles have been published on (3aR,4aS,9bbeta)-Dodecahydro-3,7-dioxo-6abeta,9aalpha-dimethyl-1H-cyclopenta[a]cyclopropa[e]naphthalene-3aalpha-acetic acid.

Structure

MOL 3D MOL SDF 3D SDF PDB SMILES InChI


  Mrv1652306192122513D          

 46 49  0  0  0  0            999 V2000
    2.8522   -1.4783   -2.3707 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4236   -2.0070   -2.6514 C   0  0  2  0  0  0  0  0  0  0  0  0
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   -0.1183   -0.0330   -2.1361 C   0  0  1  0  0  0  0  0  0  0  0  0
    0.3790   -0.2319   -0.6952 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.2483    0.8855   -0.1425 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.1443    0.7104    0.4238 C   0  0  1  0  0  0  0  0  0  0  0  0
   -1.1783    1.7838    0.0915 C   0  0  2  0  0  0  0  0  0  0  0  0
   -2.5916    1.2762    0.2127 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9472    0.1246    0.4025 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5017    2.2574    0.0542 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1964    0.2232    1.8528 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3302    1.0394    2.7595 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.0065   -1.2436    2.1235 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.2174   -2.1109    0.8965 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.7039   -1.6850   -0.2570 C   0  0  1  0  0  0  0  0  0  0  0  0
    0.6798   -2.6698   -1.4538 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.7825   -3.1066   -1.7974 C   0  0  0  0  0  0  0  0  0  0  0  0
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    1.6403   -3.2346   -3.5203 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.7585   -3.2157   -4.7380 O   0  0  0  0  0  0  0  0  0  0  0  0
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M  END

     RDKit          3D

 46 49  0  0  0  0  0  0  0  0999 V2000
    2.8522   -1.4783   -2.3707 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4236   -2.0070   -2.6514 C   0  0  2  0  0  0  0  0  0  0  0  0
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M  END


  Mrv1652306192122513D          

 46 49  0  0  0  0            999 V2000
    2.8522   -1.4783   -2.3707 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4236   -2.0070   -2.6514 C   0  0  2  0  0  0  0  0  0  0  0  0
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  6 30  1  0  0  0  0
  6 31  1  0  0  0  0
 18 40  1  0  0  0  0
 18 41  1  0  0  0  0
 18 42  1  0  0  0  0
 15 37  1  0  0  0  0
 15 38  1  0  0  0  0
 19 43  1  0  0  0  0
 19 44  1  0  0  0  0
 20 45  1  0  0  0  0
 20 46  1  0  0  0  0
  1 23  1  0  0  0  0
  1 24  1  0  0  0  0
  1 25  1  0  0  0  0
 11 34  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0029144

> <DATABASE_NAME>
NP-MRD

> <SMILES>
[H]OC(=O)C([H])([H])[C@@]12C(=O)C([H])([H])C([H])([H])[C@]3([H])[C@@]1(C2([H])[H])C([H])([H])C([H])([H])[C@@]1(C(=O)C([H])([H])C([H])([H])[C@@]31C([H])([H])[H])C([H])([H])[H]

> <INCHI_IDENTIFIER>
InChI=1S/C18H24O4/c1-15-6-5-12(19)16(15,2)7-8-17-10-18(17,9-14(21)22)13(20)4-3-11(15)17/h11H,3-10H2,1-2H3,(H,21,22)/t11-,15-,16+,17-,18+/m0/s1

> <INCHI_KEY>
DYBBZRYFSCINDM-OQGBHLKSSA-N

> <FORMULA>
C18H24O4

> <MOLECULAR_WEIGHT>
304.386

> <EXACT_MASS>
304.167459253

> <JCHEM_ACCEPTOR_COUNT>
4

> <JCHEM_ATOM_COUNT>
46

> <JCHEM_AVERAGE_POLARIZABILITY>
32.26491291545818

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
1

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
2-[(1S,4S,8S,9S,13R)-4,8-dimethyl-5,12-dioxotetracyclo[7.5.0.0^{1,13}.0^{4,8}]tetradecan-13-yl]acetic acid

> <ALOGPS_LOGP>
2.26

> <JCHEM_LOGP>
2.590415751

> <ALOGPS_LOGS>
-3.78

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
4

> <JCHEM_PHYSIOLOGICAL_CHARGE>
-1

> <JCHEM_PKA>
19.544063121212137

> <JCHEM_PKA_STRONGEST_ACIDIC>
4.4396452824956665

> <JCHEM_PKA_STRONGEST_BASIC>
-7.187318023809315

> <JCHEM_POLAR_SURFACE_AREA>
71.44

> <JCHEM_REFRACTIVITY>
79.6976

> <JCHEM_ROTATABLE_BOND_COUNT>
2

> <JCHEM_RULE_OF_FIVE>
1

> <ALOGPS_SOLUBILITY>
5.09e-02 g/l

> <JCHEM_TRADITIONAL_IUPAC>
[(1S,4S,8S,9S,13R)-4,8-dimethyl-5,12-dioxotetracyclo[7.5.0.0^{1,13}.0^{4,8}]tetradecan-13-yl]acetic acid

> <JCHEM_VEBER_RULE>
0

$$$$

     RDKit          3D

 46 49  0  0  0  0  0  0  0  0999 V2000
    2.8522   -1.4783   -2.3707 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4236   -2.0070   -2.6514 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.5703   -0.8829   -3.2222 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1183   -0.0330   -2.1361 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.3790   -0.2319   -0.6952 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.2483    0.8855   -0.1425 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1443    0.7104    0.4238 C   0  0  1  0  0  0  0  0  0  0  0  0
   -1.1783    1.7838    0.0915 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5916    1.2762    0.2127 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9472    0.1246    0.4025 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5017    2.2574    0.0542 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1964    0.2232    1.8528 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3302    1.0394    2.7595 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.0065   -1.2436    2.1235 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2174   -2.1109    0.8965 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7039   -1.6850   -0.2570 C   0  0  1  0  0  0  0  0  0  0  0  0
    0.6798   -2.6698   -1.4538 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.7825   -3.1066   -1.7974 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4898   -3.9712   -1.2522 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.7335   -4.4947   -2.6779 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.6403   -3.2346   -3.5203 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.7585   -3.2157   -4.7380 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.8636   -0.6062   -1.7148 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.5054   -2.2349   -1.9247 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.3344   -1.1747   -3.3088 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1969   -1.2787   -3.9004 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.1828   -0.2279   -3.8560 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0106    1.0160   -2.4382 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1976   -0.2216   -2.1588 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.0967    0.6324    0.4871 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.4478    1.7565   -0.7596 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0455    2.1836   -0.9178 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0551    2.6189    0.7914 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.3652    1.8083    0.1703 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.0259   -1.3763    2.5025 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6930   -1.5437    2.9114 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2697   -2.0347    0.6000 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0273   -3.1561    1.1661 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.7294   -1.6814    0.1392 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8600   -3.5793   -2.7820 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4914   -2.2768   -1.7914 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1530   -3.8359   -1.0672 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.4460   -3.7767   -0.7531 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.9664   -4.7153   -0.6422 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.7206   -4.9527   -2.7718 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.9522   -5.1946   -2.9861 H   0  0  0  0  0  0  0  0  0  0  0  0
  5 16  1  0
 13 12  2  0
  7  8  1  6
 17 18  1  6
  7 12  1  0
 16 39  1  1
  5  4  1  6
  2 17  1  0
 16 17  1  0
  2  3  1  0
  3  4  1  0
  9  8  1  0
  7  6  1  0
 17 19  1  0
 19 20  1  0
 20 21  1  0
 21  2  1  0
  7  5  1  0
  2  1  1  1
 12 14  1  0
 21 22  2  0
  5  6  1  0
 14 15  1  0
  9 11  1  0
 15 16  1  0
  9 10  2  0
  8 32  1  0
  8 33  1  0
 14 35  1  0
 14 36  1  0
  3 26  1  0
  3 27  1  0
  4 28  1  0
  4 29  1  0
  6 30  1  0
  6 31  1  0
 18 40  1  0
 18 41  1  0
 18 42  1  0
 15 37  1  0
 15 38  1  0
 19 43  1  0
 19 44  1  0
 20 45  1  0
 20 46  1  0
  1 23  1  0
  1 24  1  0
  1 25  1  0
 11 34  1  0
M  END

HEADER    PROTEIN                                 19-JUN-21   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   19-JUN-21         0                                  
HETATM    1  C   UNK     0       2.852  -1.478  -2.371  0.00  0.00           C+0
HETATM    2  C   UNK     0       1.424  -2.007  -2.651  0.00  0.00           C+0
HETATM    3  C   UNK     0       0.570  -0.883  -3.222  0.00  0.00           C+0
HETATM    4  C   UNK     0      -0.118  -0.033  -2.136  0.00  0.00           C+0
HETATM    5  C   UNK     0       0.379  -0.232  -0.695  0.00  0.00           C+0
HETATM    6  C   UNK     0       1.248   0.886  -0.143  0.00  0.00           C+0
HETATM    7  C   UNK     0      -0.144   0.710   0.424  0.00  0.00           C+0
HETATM    8  C   UNK     0      -1.178   1.784   0.092  0.00  0.00           C+0
HETATM    9  C   UNK     0      -2.592   1.276   0.213  0.00  0.00           C+0
HETATM   10  O   UNK     0      -2.947   0.125   0.403  0.00  0.00           O+0
HETATM   11  O   UNK     0      -3.502   2.257   0.054  0.00  0.00           O+0
HETATM   12  C   UNK     0      -0.196   0.223   1.853  0.00  0.00           C+0
HETATM   13  O   UNK     0      -0.330   1.039   2.760  0.00  0.00           O+0
HETATM   14  C   UNK     0       0.007  -1.244   2.123  0.00  0.00           C+0
HETATM   15  C   UNK     0      -0.217  -2.111   0.897  0.00  0.00           C+0
HETATM   16  C   UNK     0       0.704  -1.685  -0.257  0.00  0.00           C+0
HETATM   17  C   UNK     0       0.680  -2.670  -1.454  0.00  0.00           C+0
HETATM   18  C   UNK     0      -0.783  -3.107  -1.797  0.00  0.00           C+0
HETATM   19  C   UNK     0       1.490  -3.971  -1.252  0.00  0.00           C+0
HETATM   20  C   UNK     0       1.734  -4.495  -2.678  0.00  0.00           C+0
HETATM   21  C   UNK     0       1.640  -3.235  -3.520  0.00  0.00           C+0
HETATM   22  O   UNK     0       1.759  -3.216  -4.738  0.00  0.00           O+0
HETATM   23  H   UNK     0       2.864  -0.606  -1.715  0.00  0.00           H+0
HETATM   24  H   UNK     0       3.505  -2.235  -1.925  0.00  0.00           H+0
HETATM   25  H   UNK     0       3.334  -1.175  -3.309  0.00  0.00           H+0
HETATM   26  H   UNK     0      -0.197  -1.279  -3.900  0.00  0.00           H+0
HETATM   27  H   UNK     0       1.183  -0.228  -3.856  0.00  0.00           H+0
HETATM   28  H   UNK     0      -0.011   1.016  -2.438  0.00  0.00           H+0
HETATM   29  H   UNK     0      -1.198  -0.222  -2.159  0.00  0.00           H+0
HETATM   30  H   UNK     0       2.097   0.632   0.487  0.00  0.00           H+0
HETATM   31  H   UNK     0       1.448   1.757  -0.760  0.00  0.00           H+0
HETATM   32  H   UNK     0      -1.046   2.184  -0.918  0.00  0.00           H+0
HETATM   33  H   UNK     0      -1.055   2.619   0.791  0.00  0.00           H+0
HETATM   34  H   UNK     0      -4.365   1.808   0.170  0.00  0.00           H+0
HETATM   35  H   UNK     0       1.026  -1.376   2.502  0.00  0.00           H+0
HETATM   36  H   UNK     0      -0.693  -1.544   2.911  0.00  0.00           H+0
HETATM   37  H   UNK     0      -1.270  -2.035   0.600  0.00  0.00           H+0
HETATM   38  H   UNK     0      -0.027  -3.156   1.166  0.00  0.00           H+0
HETATM   39  H   UNK     0       1.729  -1.681   0.139  0.00  0.00           H+0
HETATM   40  H   UNK     0      -0.860  -3.579  -2.782  0.00  0.00           H+0
HETATM   41  H   UNK     0      -1.491  -2.277  -1.791  0.00  0.00           H+0
HETATM   42  H   UNK     0      -1.153  -3.836  -1.067  0.00  0.00           H+0
HETATM   43  H   UNK     0       2.446  -3.777  -0.753  0.00  0.00           H+0
HETATM   44  H   UNK     0       0.966  -4.715  -0.642  0.00  0.00           H+0
HETATM   45  H   UNK     0       2.721  -4.953  -2.772  0.00  0.00           H+0
HETATM   46  H   UNK     0       0.952  -5.195  -2.986  0.00  0.00           H+0
CONECT    1    2   23   24   25                                             
CONECT    2   17    3   21    1                                             
CONECT    3    2    4   26   27                                             
CONECT    4    5    3   28   29                                             
CONECT    5   16    4    7    6                                             
CONECT    6    7    5   30   31                                             
CONECT    7    8   12    6    5                                             
CONECT    8    7    9   32   33                                             
CONECT    9    8   11   10                                                  
CONECT   10    9                                                            
CONECT   11    9   34                                                       
CONECT   12   13    7   14                                                  
CONECT   13   12                                                            
CONECT   14   12   15   35   36                                             
CONECT   15   14   16   37   38                                             
CONECT   16    5   39   17   15                                             
CONECT   17   18    2   16   19                                             
CONECT   18   17   40   41   42                                             
CONECT   19   17   20   43   44                                             
CONECT   20   19   21   45   46                                             
CONECT   21   20    2   22                                                  
CONECT   22   21                                                            
CONECT   23    1                                                            
CONECT   24    1                                                            
CONECT   25    1                                                            
CONECT   26    3                                                            
CONECT   27    3                                                            
CONECT   28    4                                                            
CONECT   29    4                                                            
CONECT   30    6                                                            
CONECT   31    6                                                            
CONECT   32    8                                                            
CONECT   33    8                                                            
CONECT   34   11                                                            
CONECT   35   14                                                            
CONECT   36   14                                                            
CONECT   37   15                                                            
CONECT   38   15                                                            
CONECT   39   16                                                            
CONECT   40   18                                                            
CONECT   41   18                                                            
CONECT   42   18                                                            
CONECT   43   19                                                            
CONECT   44   19                                                            
CONECT   45   20                                                            
CONECT   46   20                                                            
MASTER        0    0    0    0    0    0    0    0   46    0   98    0
END

RDKit          3D

46 49  0  0  0  0  0  0  0  0999 V2000
    2.8522   -1.4783   -2.3707 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4236   -2.0070   -2.6514 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.5703   -0.8829   -3.2222 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1183   -0.0330   -2.1361 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.3790   -0.2319   -0.6952 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.2483    0.8855   -0.1425 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1443    0.7104    0.4238 C   0  0  1  0  0  0  0  0  0  0  0  0
   -1.1783    1.7838    0.0915 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5916    1.2762    0.2127 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9472    0.1246    0.4025 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5017    2.2574    0.0542 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1964    0.2232    1.8528 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3302    1.0394    2.7595 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.0065   -1.2436    2.1235 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2174   -2.1109    0.8965 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7039   -1.6850   -0.2570 C   0  0  1  0  0  0  0  0  0  0  0  0
    0.6798   -2.6698   -1.4538 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.7825   -3.1066   -1.7974 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4898   -3.9712   -1.2522 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.7335   -4.4947   -2.6779 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.6403   -3.2346   -3.5203 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.7585   -3.2157   -4.7380 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.8636   -0.6062   -1.7148 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.5054   -2.2349   -1.9247 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.3344   -1.1747   -3.3088 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1969   -1.2787   -3.9004 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.1828   -0.2279   -3.8560 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0106    1.0160   -2.4382 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1976   -0.2216   -2.1588 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.0967    0.6324    0.4871 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.4478    1.7565   -0.7596 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0455    2.1836   -0.9178 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0551    2.6189    0.7914 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.3652    1.8083    0.1703 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.0259   -1.3763    2.5025 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6930   -1.5437    2.9114 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2697   -2.0347    0.6000 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0273   -3.1561    1.1661 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.7294   -1.6814    0.1392 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8600   -3.5793   -2.7820 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4914   -2.2768   -1.7914 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1530   -3.8359   -1.0672 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.4460   -3.7767   -0.7531 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.9664   -4.7153   -0.6422 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.7206   -4.9527   -2.7718 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.9522   -5.1946   -2.9861 H   0  0  0  0  0  0  0  0  0  0  0  0
  5 16  1  0
 13 12  2  0
  7  8  1  6
 17 18  1  6
  7 12  1  0
 16 39  1  1
  5  4  1  6
  2 17  1  0
 16 17  1  0
  2  3  1  0
  3  4  1  0
  9  8  1  0
  7  6  1  0
 17 19  1  0
 19 20  1  0
 20 21  1  0
 21  2  1  0
  7  5  1  0
  2  1  1  1
 12 14  1  0
 21 22  2  0
  5  6  1  0
 14 15  1  0
  9 11  1  0
 15 16  1  0
  9 10  2  0
  8 32  1  0
  8 33  1  0
 14 35  1  0
 14 36  1  0
  3 26  1  0
  3 27  1  0
  4 28  1  0
  4 29  1  0
  6 30  1  0
  6 31  1  0
 18 40  1  0
 18 41  1  0
 18 42  1  0
 15 37  1  0
 15 38  1  0
 19 43  1  0
 19 44  1  0
 20 45  1  0
 20 46  1  0
  1 23  1  0
  1 24  1  0
  1 25  1  0
 11 34  1  0
M  END

View in JSmol View DFT Assignments 3D Conformers

Synonyms

Value	Source
(3AR,4as,9bbeta)-dodecahydro-3,7-dioxo-6abeta,9aalpha-dimethyl-1H-cyclopenta[a]cyclopropa[e]naphthalene-3aalpha-acetate	Generator

Chemical Formula

C₁₈H₂₄O₄

Average Mass

304.3860 Da

Monoisotopic Mass

304.16746 Da

IUPAC Name

2-[(1S,4S,8S,9S,13R)-4,8-dimethyl-5,12-dioxotetracyclo[7.5.0.0^{1,13}.0^{4,8}]tetradecan-13-yl]acetic acid

Traditional Name

[(1S,4S,8S,9S,13R)-4,8-dimethyl-5,12-dioxotetracyclo[7.5.0.0^{1,13}.0^{4,8}]tetradecan-13-yl]acetic acid

CAS Registry Number

Not Available

SMILES

[H]OC(=O)C([H])([H])[C@@]12C(=O)C([H])([H])C([H])([H])[C@]3([H])[C@@]1(C2([H])[H])C([H])([H])C([H])([H])[C@@]1(C(=O)C([H])([H])C([H])([H])[C@@]31C([H])([H])[H])C([H])([H])[H]

InChI Identifier

InChI=1S/C18H24O4/c1-15-6-5-12(19)16(15,2)7-8-17-10-18(17,9-14(21)22)13(20)4-3-11(15)17/h11H,3-10H2,1-2H3,(H,21,22)/t11-,15-,16+,17-,18+/m0/s1

InChI Key

DYBBZRYFSCINDM-OQGBHLKSSA-N

Experimental Spectra

Spectrum Type	Description	Depositor Email	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 300 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 100 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 200 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 400 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 500 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 600 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 700 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 800 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 900 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 1000 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 100 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 125 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 150 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 175 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 200 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 225 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 250 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Aglaia rubiginosa	JEOL database	Weber, S., et al, J. Nat. Prod. 63, 636 (2000)

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as prostaglandins and related compounds. These are unsaturated carboxylic acids consisting of a 20 carbon skeleton that also contains a five member ring, and are based upon the fatty acid arachidonic acid.

Kingdom

Organic compounds

Super Class

Lipids and lipid-like molecules

Class

Fatty Acyls

Sub Class

Eicosanoids

Direct Parent

Prostaglandins and related compounds

Alternative Parents

Substituents

Prostaglandin skeleton
Ketone
Monocarboxylic acid or derivatives
Carboxylic acid
Carboxylic acid derivative
Organic oxygen compound
Organic oxide
Hydrocarbon derivative
Organooxygen compound
Carbonyl group
Aliphatic homopolycyclic compound

Molecular Framework

Aliphatic homopolycyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	2.26	ALOGPS
logP	2.59	ChemAxon
logS	-3.8	ALOGPS
pKa (Strongest Acidic)	4.44	ChemAxon
pKa (Strongest Basic)	-7.2	ChemAxon
Physiological Charge	-1	ChemAxon
Hydrogen Acceptor Count	4	ChemAxon
Hydrogen Donor Count	1	ChemAxon
Polar Surface Area	71.44 Å²	ChemAxon
Rotatable Bond Count	2	ChemAxon
Refractivity	79.7 m³·mol⁻¹	ChemAxon
Polarizability	32.26 Å³	ChemAxon
Number of Rings	4	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

9003651

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

10828351

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

Weber, S., et al. (2000). Weber, S., et al, J. Nat. Prod. 63, 636 (2000). J. Nat. Prod..

Showing NP-Card for 5a,6-methano-3a,9b-dimethyl-3,7-dioxo-cyclopentano[ (NP0029144)

MOL for NP0029144 (5a,6-methano-3a,9b-dimethyl-3,7-dioxo-cyclopentano[)

3D MOL for NP0029144 (5a,6-methano-3a,9b-dimethyl-3,7-dioxo-cyclopentano[)

3D SDF for NP0029144 (5a,6-methano-3a,9b-dimethyl-3,7-dioxo-cyclopentano[)

3D-SDF for NP0029144 (5a,6-methano-3a,9b-dimethyl-3,7-dioxo-cyclopentano[)

PDB for NP0029144 (5a,6-methano-3a,9b-dimethyl-3,7-dioxo-cyclopentano[)

3D PDB for NP0029144 (5a,6-methano-3a,9b-dimethyl-3,7-dioxo-cyclopentano[)

SMILES for NP0029144 (5a,6-methano-3a,9b-dimethyl-3,7-dioxo-cyclopentano[)

INCHI for NP0029144 (5a,6-methano-3a,9b-dimethyl-3,7-dioxo-cyclopentano[)

Structure for NP0029144 (5a,6-methano-3a,9b-dimethyl-3,7-dioxo-cyclopentano[)

3D Structure for NP0029144 (5a,6-methano-3a,9b-dimethyl-3,7-dioxo-cyclopentano[)