Showing NP-Card for phanginin E (NP0025340)
| Record Information | |||||||||||||||||||||||||||||||||||||||||||||||||||||||
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| Version | 2.0 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Created at | 2021-06-19 17:29:15 UTC | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Updated at | 2021-06-29 23:50:14 UTC | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
| NP-MRD ID | NP0025340 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Secondary Accession Numbers | None | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Natural Product Identification | |||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Common Name | phanginin E | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Provided By | JEOL Database![]() | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Description | phanginin E is found in Caesalpinia sappan Linn. phanginin E was first documented in 2008 (Yodsaoue, O., et al.). | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Structure | MOL for NP0025340 (phanginin E)
Mrv1652306192119293D
52 56 0 0 0 0 999 V2000
3.2460 -5.5008 -0.3423 C 0 0 0 0 0 0 0 0 0 0 0 0
2.3135 -4.6804 0.3633 O 0 0 0 0 0 0 0 0 0 0 0 0
2.8624 -3.5567 0.9112 C 0 0 0 0 0 0 0 0 0 0 0 0
4.0287 -3.2144 0.7587 O 0 0 0 0 0 0 0 0 0 0 0 0
1.8103 -2.7525 1.6731 C 0 0 2 0 0 0 0 0 0 0 0 0
2.4870 -1.5575 2.3801 C 0 0 1 0 0 0 0 0 0 0 0 0
1.4894 -0.6541 3.0961 C 0 0 2 0 0 0 0 0 0 0 0 0
0.2694 -0.3108 2.2428 C 0 0 1 0 0 0 0 0 0 0 0 0
-0.3723 -1.5122 1.4821 C 0 0 1 0 0 0 0 0 0 0 0 0
-0.9598 -2.5227 2.4914 C 0 0 1 0 0 0 0 0 0 0 0 0
-0.0026 -3.3026 3.2301 O 0 0 0 0 0 0 0 0 0 0 0 0
1.2280 -3.6281 2.7692 C 0 0 0 0 0 0 0 0 0 0 0 0
1.8693 -4.5198 3.3178 O 0 0 0 0 0 0 0 0 0 0 0 0
-1.5252 -1.0435 0.5069 C 0 0 1 0 0 0 0 0 0 0 0 0
-2.6459 -0.2438 1.2434 C 0 0 1 0 0 0 0 0 0 0 0 0
-3.5153 0.4422 0.2689 C 0 0 0 0 0 0 0 0 0 0 0 0
-4.6576 1.0332 0.6897 O 0 0 0 0 0 0 0 0 0 0 0 0
-5.2020 1.6234 -0.4095 C 0 0 0 0 0 0 0 0 0 0 0 0
-4.4095 1.4146 -1.5181 C 0 0 0 0 0 0 0 0 0 0 0 0
-3.3104 0.6399 -1.0740 C 0 0 0 0 0 0 0 0 0 0 0 0
-2.1302 0.0816 -1.7992 C 0 0 2 0 0 0 0 0 0 0 0 0
-2.5754 -1.0880 -2.6885 C 0 0 0 0 0 0 0 0 0 0 0 0
-0.9938 -0.2862 -0.7657 C 0 0 2 0 0 0 0 0 0 0 0 0
0.1409 -1.0666 -1.4452 C 0 0 1 0 0 0 0 0 0 0 0 0
1.2578 -1.4392 -0.4811 C 0 0 2 0 0 0 0 0 0 0 0 0
0.7144 -2.2764 0.6932 C 0 0 1 0 0 0 0 0 0 0 0 0
4.0542 -5.8236 0.3215 H 0 0 0 0 0 0 0 0 0 0 0 0
3.6447 -4.9650 -1.2092 H 0 0 0 0 0 0 0 0 0 0 0 0
2.7148 -6.3881 -0.6974 H 0 0 0 0 0 0 0 0 0 0 0 0
3.2264 -1.9120 3.1110 H 0 0 0 0 0 0 0 0 0 0 0 0
3.0538 -0.9562 1.6583 H 0 0 0 0 0 0 0 0 0 0 0 0
1.9912 0.2715 3.4031 H 0 0 0 0 0 0 0 0 0 0 0 0
1.1606 -1.1315 4.0268 H 0 0 0 0 0 0 0 0 0 0 0 0
-0.4615 0.1546 2.9130 H 0 0 0 0 0 0 0 0 0 0 0 0
0.5629 0.4695 1.5319 H 0 0 0 0 0 0 0 0 0 0 0 0
-1.5783 -2.0068 3.2342 H 0 0 0 0 0 0 0 0 0 0 0 0
-1.6129 -3.2448 1.9870 H 0 0 0 0 0 0 0 0 0 0 0 0
-2.0034 -1.9576 0.1218 H 0 0 0 0 0 0 0 0 0 0 0 0
-3.2407 -0.9184 1.8684 H 0 0 0 0 0 0 0 0 0 0 0 0
-2.2258 0.5280 1.8930 H 0 0 0 0 0 0 0 0 0 0 0 0
-6.1343 2.1448 -0.2432 H 0 0 0 0 0 0 0 0 0 0 0 0
-4.6086 1.7732 -2.5181 H 0 0 0 0 0 0 0 0 0 0 0 0
-1.7332 0.8641 -2.4603 H 0 0 0 0 0 0 0 0 0 0 0 0
-2.8935 -1.9508 -2.0939 H 0 0 0 0 0 0 0 0 0 0 0 0
-1.7735 -1.4068 -3.3612 H 0 0 0 0 0 0 0 0 0 0 0 0
-3.4213 -0.7993 -3.3235 H 0 0 0 0 0 0 0 0 0 0 0 0
-0.5752 0.6691 -0.4168 H 0 0 0 0 0 0 0 0 0 0 0 0
-0.2405 -1.9966 -1.8821 H 0 0 0 0 0 0 0 0 0 0 0 0
0.5562 -0.4730 -2.2683 H 0 0 0 0 0 0 0 0 0 0 0 0
1.7547 -0.5267 -0.1367 H 0 0 0 0 0 0 0 0 0 0 0 0
2.0097 -2.0097 -1.0382 H 0 0 0 0 0 0 0 0 0 0 0 0
0.2405 -3.1668 0.2511 H 0 0 0 0 0 0 0 0 0 0 0 0
14 38 1 6 0 0 0
16 20 2 0 0 0 0
25 24 1 0 0 0 0
24 23 1 0 0 0 0
14 9 1 0 0 0 0
14 23 1 0 0 0 0
6 5 1 0 0 0 0
20 19 1 0 0 0 0
19 18 2 0 0 0 0
18 17 1 0 0 0 0
17 16 1 0 0 0 0
5 26 1 0 0 0 0
21 22 1 0 0 0 0
9 26 1 0 0 0 0
5 3 1 6 0 0 0
14 15 1 0 0 0 0
9 10 1 1 0 0 0
23 21 1 0 0 0 0
5 12 1 0 0 0 0
16 15 1 0 0 0 0
12 11 1 0 0 0 0
10 11 1 0 0 0 0
8 9 1 0 0 0 0
26 52 1 6 0 0 0
7 6 1 0 0 0 0
3 2 1 0 0 0 0
20 21 1 0 0 0 0
2 1 1 0 0 0 0
3 4 2 0 0 0 0
8 7 1 0 0 0 0
23 47 1 1 0 0 0
26 25 1 0 0 0 0
12 13 2 0 0 0 0
8 34 1 0 0 0 0
8 35 1 0 0 0 0
7 32 1 0 0 0 0
7 33 1 0 0 0 0
25 50 1 0 0 0 0
25 51 1 0 0 0 0
24 48 1 0 0 0 0
24 49 1 0 0 0 0
15 39 1 0 0 0 0
15 40 1 0 0 0 0
6 30 1 0 0 0 0
6 31 1 0 0 0 0
21 43 1 6 0 0 0
10 36 1 0 0 0 0
10 37 1 0 0 0 0
19 42 1 0 0 0 0
18 41 1 0 0 0 0
22 44 1 0 0 0 0
22 45 1 0 0 0 0
22 46 1 0 0 0 0
1 27 1 0 0 0 0
1 28 1 0 0 0 0
1 29 1 0 0 0 0
M END
3D MOL for NP0025340 (phanginin E)
RDKit 3D
52 56 0 0 0 0 0 0 0 0999 V2000
3.2460 -5.5008 -0.3423 C 0 0 0 0 0 0 0 0 0 0 0 0
2.3135 -4.6804 0.3633 O 0 0 0 0 0 0 0 0 0 0 0 0
2.8624 -3.5567 0.9112 C 0 0 0 0 0 0 0 0 0 0 0 0
4.0287 -3.2144 0.7587 O 0 0 0 0 0 0 0 0 0 0 0 0
1.8103 -2.7525 1.6731 C 0 0 2 0 0 0 0 0 0 0 0 0
2.4870 -1.5575 2.3801 C 0 0 0 0 0 0 0 0 0 0 0 0
1.4894 -0.6541 3.0961 C 0 0 0 0 0 0 0 0 0 0 0 0
0.2694 -0.3108 2.2428 C 0 0 0 0 0 0 0 0 0 0 0 0
-0.3723 -1.5122 1.4821 C 0 0 1 0 0 0 0 0 0 0 0 0
-0.9598 -2.5227 2.4914 C 0 0 0 0 0 0 0 0 0 0 0 0
-0.0026 -3.3026 3.2301 O 0 0 0 0 0 0 0 0 0 0 0 0
1.2280 -3.6281 2.7692 C 0 0 0 0 0 0 0 0 0 0 0 0
1.8693 -4.5198 3.3178 O 0 0 0 0 0 0 0 0 0 0 0 0
-1.5252 -1.0435 0.5069 C 0 0 1 0 0 0 0 0 0 0 0 0
-2.6459 -0.2438 1.2434 C 0 0 0 0 0 0 0 0 0 0 0 0
-3.5153 0.4422 0.2689 C 0 0 0 0 0 0 0 0 0 0 0 0
-4.6576 1.0332 0.6897 O 0 0 0 0 0 0 0 0 0 0 0 0
-5.2020 1.6234 -0.4095 C 0 0 0 0 0 0 0 0 0 0 0 0
-4.4095 1.4146 -1.5181 C 0 0 0 0 0 0 0 0 0 0 0 0
-3.3104 0.6399 -1.0740 C 0 0 0 0 0 0 0 0 0 0 0 0
-2.1302 0.0816 -1.7992 C 0 0 2 0 0 0 0 0 0 0 0 0
-2.5754 -1.0880 -2.6885 C 0 0 0 0 0 0 0 0 0 0 0 0
-0.9938 -0.2862 -0.7657 C 0 0 2 0 0 0 0 0 0 0 0 0
0.1409 -1.0666 -1.4452 C 0 0 0 0 0 0 0 0 0 0 0 0
1.2578 -1.4392 -0.4811 C 0 0 0 0 0 0 0 0 0 0 0 0
0.7144 -2.2764 0.6932 C 0 0 1 0 0 0 0 0 0 0 0 0
4.0542 -5.8236 0.3215 H 0 0 0 0 0 0 0 0 0 0 0 0
3.6447 -4.9650 -1.2092 H 0 0 0 0 0 0 0 0 0 0 0 0
2.7148 -6.3881 -0.6974 H 0 0 0 0 0 0 0 0 0 0 0 0
3.2264 -1.9120 3.1110 H 0 0 0 0 0 0 0 0 0 0 0 0
3.0538 -0.9562 1.6583 H 0 0 0 0 0 0 0 0 0 0 0 0
1.9912 0.2715 3.4031 H 0 0 0 0 0 0 0 0 0 0 0 0
1.1606 -1.1315 4.0268 H 0 0 0 0 0 0 0 0 0 0 0 0
-0.4615 0.1546 2.9130 H 0 0 0 0 0 0 0 0 0 0 0 0
0.5629 0.4695 1.5319 H 0 0 0 0 0 0 0 0 0 0 0 0
-1.5783 -2.0068 3.2342 H 0 0 0 0 0 0 0 0 0 0 0 0
-1.6129 -3.2448 1.9870 H 0 0 0 0 0 0 0 0 0 0 0 0
-2.0034 -1.9576 0.1218 H 0 0 0 0 0 0 0 0 0 0 0 0
-3.2407 -0.9184 1.8684 H 0 0 0 0 0 0 0 0 0 0 0 0
-2.2258 0.5280 1.8930 H 0 0 0 0 0 0 0 0 0 0 0 0
-6.1343 2.1448 -0.2432 H 0 0 0 0 0 0 0 0 0 0 0 0
-4.6086 1.7732 -2.5181 H 0 0 0 0 0 0 0 0 0 0 0 0
-1.7332 0.8641 -2.4603 H 0 0 0 0 0 0 0 0 0 0 0 0
-2.8935 -1.9508 -2.0939 H 0 0 0 0 0 0 0 0 0 0 0 0
-1.7735 -1.4068 -3.3612 H 0 0 0 0 0 0 0 0 0 0 0 0
-3.4213 -0.7993 -3.3235 H 0 0 0 0 0 0 0 0 0 0 0 0
-0.5752 0.6691 -0.4168 H 0 0 0 0 0 0 0 0 0 0 0 0
-0.2405 -1.9966 -1.8821 H 0 0 0 0 0 0 0 0 0 0 0 0
0.5562 -0.4730 -2.2683 H 0 0 0 0 0 0 0 0 0 0 0 0
1.7547 -0.5267 -0.1367 H 0 0 0 0 0 0 0 0 0 0 0 0
2.0097 -2.0097 -1.0382 H 0 0 0 0 0 0 0 0 0 0 0 0
0.2405 -3.1668 0.2511 H 0 0 0 0 0 0 0 0 0 0 0 0
14 38 1 6
16 20 2 0
25 24 1 0
24 23 1 0
14 9 1 0
14 23 1 0
6 5 1 0
20 19 1 0
19 18 2 0
18 17 1 0
17 16 1 0
5 26 1 0
21 22 1 0
9 26 1 0
5 3 1 6
14 15 1 0
9 10 1 1
23 21 1 0
5 12 1 0
16 15 1 0
12 11 1 0
10 11 1 0
8 9 1 0
26 52 1 6
7 6 1 0
3 2 1 0
20 21 1 0
2 1 1 0
3 4 2 0
8 7 1 0
23 47 1 1
26 25 1 0
12 13 2 0
8 34 1 0
8 35 1 0
7 32 1 0
7 33 1 0
25 50 1 0
25 51 1 0
24 48 1 0
24 49 1 0
15 39 1 0
15 40 1 0
6 30 1 0
6 31 1 0
21 43 1 6
10 36 1 0
10 37 1 0
19 42 1 0
18 41 1 0
22 44 1 0
22 45 1 0
22 46 1 0
1 27 1 0
1 28 1 0
1 29 1 0
M END
3D SDF for NP0025340 (phanginin E)
Mrv1652306192119293D
52 56 0 0 0 0 999 V2000
3.2460 -5.5008 -0.3423 C 0 0 0 0 0 0 0 0 0 0 0 0
2.3135 -4.6804 0.3633 O 0 0 0 0 0 0 0 0 0 0 0 0
2.8624 -3.5567 0.9112 C 0 0 0 0 0 0 0 0 0 0 0 0
4.0287 -3.2144 0.7587 O 0 0 0 0 0 0 0 0 0 0 0 0
1.8103 -2.7525 1.6731 C 0 0 2 0 0 0 0 0 0 0 0 0
2.4870 -1.5575 2.3801 C 0 0 1 0 0 0 0 0 0 0 0 0
1.4894 -0.6541 3.0961 C 0 0 2 0 0 0 0 0 0 0 0 0
0.2694 -0.3108 2.2428 C 0 0 1 0 0 0 0 0 0 0 0 0
-0.3723 -1.5122 1.4821 C 0 0 1 0 0 0 0 0 0 0 0 0
-0.9598 -2.5227 2.4914 C 0 0 1 0 0 0 0 0 0 0 0 0
-0.0026 -3.3026 3.2301 O 0 0 0 0 0 0 0 0 0 0 0 0
1.2280 -3.6281 2.7692 C 0 0 0 0 0 0 0 0 0 0 0 0
1.8693 -4.5198 3.3178 O 0 0 0 0 0 0 0 0 0 0 0 0
-1.5252 -1.0435 0.5069 C 0 0 1 0 0 0 0 0 0 0 0 0
-2.6459 -0.2438 1.2434 C 0 0 1 0 0 0 0 0 0 0 0 0
-3.5153 0.4422 0.2689 C 0 0 0 0 0 0 0 0 0 0 0 0
-4.6576 1.0332 0.6897 O 0 0 0 0 0 0 0 0 0 0 0 0
-5.2020 1.6234 -0.4095 C 0 0 0 0 0 0 0 0 0 0 0 0
-4.4095 1.4146 -1.5181 C 0 0 0 0 0 0 0 0 0 0 0 0
-3.3104 0.6399 -1.0740 C 0 0 0 0 0 0 0 0 0 0 0 0
-2.1302 0.0816 -1.7992 C 0 0 2 0 0 0 0 0 0 0 0 0
-2.5754 -1.0880 -2.6885 C 0 0 0 0 0 0 0 0 0 0 0 0
-0.9938 -0.2862 -0.7657 C 0 0 2 0 0 0 0 0 0 0 0 0
0.1409 -1.0666 -1.4452 C 0 0 1 0 0 0 0 0 0 0 0 0
1.2578 -1.4392 -0.4811 C 0 0 2 0 0 0 0 0 0 0 0 0
0.7144 -2.2764 0.6932 C 0 0 1 0 0 0 0 0 0 0 0 0
4.0542 -5.8236 0.3215 H 0 0 0 0 0 0 0 0 0 0 0 0
3.6447 -4.9650 -1.2092 H 0 0 0 0 0 0 0 0 0 0 0 0
2.7148 -6.3881 -0.6974 H 0 0 0 0 0 0 0 0 0 0 0 0
3.2264 -1.9120 3.1110 H 0 0 0 0 0 0 0 0 0 0 0 0
3.0538 -0.9562 1.6583 H 0 0 0 0 0 0 0 0 0 0 0 0
1.9912 0.2715 3.4031 H 0 0 0 0 0 0 0 0 0 0 0 0
1.1606 -1.1315 4.0268 H 0 0 0 0 0 0 0 0 0 0 0 0
-0.4615 0.1546 2.9130 H 0 0 0 0 0 0 0 0 0 0 0 0
0.5629 0.4695 1.5319 H 0 0 0 0 0 0 0 0 0 0 0 0
-1.5783 -2.0068 3.2342 H 0 0 0 0 0 0 0 0 0 0 0 0
-1.6129 -3.2448 1.9870 H 0 0 0 0 0 0 0 0 0 0 0 0
-2.0034 -1.9576 0.1218 H 0 0 0 0 0 0 0 0 0 0 0 0
-3.2407 -0.9184 1.8684 H 0 0 0 0 0 0 0 0 0 0 0 0
-2.2258 0.5280 1.8930 H 0 0 0 0 0 0 0 0 0 0 0 0
-6.1343 2.1448 -0.2432 H 0 0 0 0 0 0 0 0 0 0 0 0
-4.6086 1.7732 -2.5181 H 0 0 0 0 0 0 0 0 0 0 0 0
-1.7332 0.8641 -2.4603 H 0 0 0 0 0 0 0 0 0 0 0 0
-2.8935 -1.9508 -2.0939 H 0 0 0 0 0 0 0 0 0 0 0 0
-1.7735 -1.4068 -3.3612 H 0 0 0 0 0 0 0 0 0 0 0 0
-3.4213 -0.7993 -3.3235 H 0 0 0 0 0 0 0 0 0 0 0 0
-0.5752 0.6691 -0.4168 H 0 0 0 0 0 0 0 0 0 0 0 0
-0.2405 -1.9966 -1.8821 H 0 0 0 0 0 0 0 0 0 0 0 0
0.5562 -0.4730 -2.2683 H 0 0 0 0 0 0 0 0 0 0 0 0
1.7547 -0.5267 -0.1367 H 0 0 0 0 0 0 0 0 0 0 0 0
2.0097 -2.0097 -1.0382 H 0 0 0 0 0 0 0 0 0 0 0 0
0.2405 -3.1668 0.2511 H 0 0 0 0 0 0 0 0 0 0 0 0
14 38 1 6 0 0 0
16 20 2 0 0 0 0
25 24 1 0 0 0 0
24 23 1 0 0 0 0
14 9 1 0 0 0 0
14 23 1 0 0 0 0
6 5 1 0 0 0 0
20 19 1 0 0 0 0
19 18 2 0 0 0 0
18 17 1 0 0 0 0
17 16 1 0 0 0 0
5 26 1 0 0 0 0
21 22 1 0 0 0 0
9 26 1 0 0 0 0
5 3 1 6 0 0 0
14 15 1 0 0 0 0
9 10 1 1 0 0 0
23 21 1 0 0 0 0
5 12 1 0 0 0 0
16 15 1 0 0 0 0
12 11 1 0 0 0 0
10 11 1 0 0 0 0
8 9 1 0 0 0 0
26 52 1 6 0 0 0
7 6 1 0 0 0 0
3 2 1 0 0 0 0
20 21 1 0 0 0 0
2 1 1 0 0 0 0
3 4 2 0 0 0 0
8 7 1 0 0 0 0
23 47 1 1 0 0 0
26 25 1 0 0 0 0
12 13 2 0 0 0 0
8 34 1 0 0 0 0
8 35 1 0 0 0 0
7 32 1 0 0 0 0
7 33 1 0 0 0 0
25 50 1 0 0 0 0
25 51 1 0 0 0 0
24 48 1 0 0 0 0
24 49 1 0 0 0 0
15 39 1 0 0 0 0
15 40 1 0 0 0 0
6 30 1 0 0 0 0
6 31 1 0 0 0 0
21 43 1 6 0 0 0
10 36 1 0 0 0 0
10 37 1 0 0 0 0
19 42 1 0 0 0 0
18 41 1 0 0 0 0
22 44 1 0 0 0 0
22 45 1 0 0 0 0
22 46 1 0 0 0 0
1 27 1 0 0 0 0
1 28 1 0 0 0 0
1 29 1 0 0 0 0
M END
> <DATABASE_ID>
NP0025340
> <DATABASE_NAME>
NP-MRD
> <SMILES>
[H]C1=C([H])C2=C(O1)C([H])([H])[C@@]1([H])[C@@]([H])(C([H])([H])C([H])([H])[C@@]3([H])[C@]4(C(=O)OC([H])([H])[H])C(=O)OC([H])([H])[C@]13C([H])([H])C([H])([H])C4([H])[H])[C@@]2([H])C([H])([H])[H]
> <INCHI_IDENTIFIER>
InChI=1S/C21H26O5/c1-12-13-4-5-17-20(15(13)10-16-14(12)6-9-25-16)7-3-8-21(17,18(22)24-2)19(23)26-11-20/h6,9,12-13,15,17H,3-5,7-8,10-11H2,1-2H3/t12-,13+,15+,17-,20-,21-/m1/s1
> <INCHI_KEY>
QNKSEHIPPBVETG-PCKVVBOYSA-N
> <FORMULA>
C21H26O5
> <MOLECULAR_WEIGHT>
358.434
> <EXACT_MASS>
358.178023937
> <JCHEM_ACCEPTOR_COUNT>
2
> <JCHEM_ATOM_COUNT>
52
> <JCHEM_AVERAGE_POLARIZABILITY>
38.65763938448493
> <JCHEM_BIOAVAILABILITY>
1
> <JCHEM_DONOR_COUNT>
0
> <JCHEM_FORMAL_CHARGE>
0
> <JCHEM_GHOSE_FILTER>
1
> <JCHEM_IUPAC>
methyl (1R,2S,9R,10S,13R,14R)-9-methyl-15-oxo-5,16-dioxapentacyclo[12.3.3.0^{1,13}.0^{2,10}.0^{4,8}]icosa-4(8),6-diene-14-carboxylate
> <ALOGPS_LOGP>
3.42
> <JCHEM_LOGP>
3.415850100666667
> <ALOGPS_LOGS>
-4.22
> <JCHEM_MDDR_LIKE_RULE>
0
> <JCHEM_NUMBER_OF_RINGS>
5
> <JCHEM_PHYSIOLOGICAL_CHARGE>
0
> <JCHEM_PKA_STRONGEST_BASIC>
-2.743105688468924
> <JCHEM_POLAR_SURFACE_AREA>
65.74000000000001
> <JCHEM_REFRACTIVITY>
93.61249999999998
> <JCHEM_ROTATABLE_BOND_COUNT>
2
> <JCHEM_RULE_OF_FIVE>
1
> <ALOGPS_SOLUBILITY>
2.14e-02 g/l
> <JCHEM_TRADITIONAL_IUPAC>
methyl (1R,2S,9R,10S,13R,14R)-9-methyl-15-oxo-5,16-dioxapentacyclo[12.3.3.0^{1,13}.0^{2,10}.0^{4,8}]icosa-4(8),6-diene-14-carboxylate
> <JCHEM_VEBER_RULE>
0
$$$$
3D-SDF for NP0025340 (phanginin E)
RDKit 3D
52 56 0 0 0 0 0 0 0 0999 V2000
3.2460 -5.5008 -0.3423 C 0 0 0 0 0 0 0 0 0 0 0 0
2.3135 -4.6804 0.3633 O 0 0 0 0 0 0 0 0 0 0 0 0
2.8624 -3.5567 0.9112 C 0 0 0 0 0 0 0 0 0 0 0 0
4.0287 -3.2144 0.7587 O 0 0 0 0 0 0 0 0 0 0 0 0
1.8103 -2.7525 1.6731 C 0 0 2 0 0 0 0 0 0 0 0 0
2.4870 -1.5575 2.3801 C 0 0 0 0 0 0 0 0 0 0 0 0
1.4894 -0.6541 3.0961 C 0 0 0 0 0 0 0 0 0 0 0 0
0.2694 -0.3108 2.2428 C 0 0 0 0 0 0 0 0 0 0 0 0
-0.3723 -1.5122 1.4821 C 0 0 1 0 0 0 0 0 0 0 0 0
-0.9598 -2.5227 2.4914 C 0 0 0 0 0 0 0 0 0 0 0 0
-0.0026 -3.3026 3.2301 O 0 0 0 0 0 0 0 0 0 0 0 0
1.2280 -3.6281 2.7692 C 0 0 0 0 0 0 0 0 0 0 0 0
1.8693 -4.5198 3.3178 O 0 0 0 0 0 0 0 0 0 0 0 0
-1.5252 -1.0435 0.5069 C 0 0 1 0 0 0 0 0 0 0 0 0
-2.6459 -0.2438 1.2434 C 0 0 0 0 0 0 0 0 0 0 0 0
-3.5153 0.4422 0.2689 C 0 0 0 0 0 0 0 0 0 0 0 0
-4.6576 1.0332 0.6897 O 0 0 0 0 0 0 0 0 0 0 0 0
-5.2020 1.6234 -0.4095 C 0 0 0 0 0 0 0 0 0 0 0 0
-4.4095 1.4146 -1.5181 C 0 0 0 0 0 0 0 0 0 0 0 0
-3.3104 0.6399 -1.0740 C 0 0 0 0 0 0 0 0 0 0 0 0
-2.1302 0.0816 -1.7992 C 0 0 2 0 0 0 0 0 0 0 0 0
-2.5754 -1.0880 -2.6885 C 0 0 0 0 0 0 0 0 0 0 0 0
-0.9938 -0.2862 -0.7657 C 0 0 2 0 0 0 0 0 0 0 0 0
0.1409 -1.0666 -1.4452 C 0 0 0 0 0 0 0 0 0 0 0 0
1.2578 -1.4392 -0.4811 C 0 0 0 0 0 0 0 0 0 0 0 0
0.7144 -2.2764 0.6932 C 0 0 1 0 0 0 0 0 0 0 0 0
4.0542 -5.8236 0.3215 H 0 0 0 0 0 0 0 0 0 0 0 0
3.6447 -4.9650 -1.2092 H 0 0 0 0 0 0 0 0 0 0 0 0
2.7148 -6.3881 -0.6974 H 0 0 0 0 0 0 0 0 0 0 0 0
3.2264 -1.9120 3.1110 H 0 0 0 0 0 0 0 0 0 0 0 0
3.0538 -0.9562 1.6583 H 0 0 0 0 0 0 0 0 0 0 0 0
1.9912 0.2715 3.4031 H 0 0 0 0 0 0 0 0 0 0 0 0
1.1606 -1.1315 4.0268 H 0 0 0 0 0 0 0 0 0 0 0 0
-0.4615 0.1546 2.9130 H 0 0 0 0 0 0 0 0 0 0 0 0
0.5629 0.4695 1.5319 H 0 0 0 0 0 0 0 0 0 0 0 0
-1.5783 -2.0068 3.2342 H 0 0 0 0 0 0 0 0 0 0 0 0
-1.6129 -3.2448 1.9870 H 0 0 0 0 0 0 0 0 0 0 0 0
-2.0034 -1.9576 0.1218 H 0 0 0 0 0 0 0 0 0 0 0 0
-3.2407 -0.9184 1.8684 H 0 0 0 0 0 0 0 0 0 0 0 0
-2.2258 0.5280 1.8930 H 0 0 0 0 0 0 0 0 0 0 0 0
-6.1343 2.1448 -0.2432 H 0 0 0 0 0 0 0 0 0 0 0 0
-4.6086 1.7732 -2.5181 H 0 0 0 0 0 0 0 0 0 0 0 0
-1.7332 0.8641 -2.4603 H 0 0 0 0 0 0 0 0 0 0 0 0
-2.8935 -1.9508 -2.0939 H 0 0 0 0 0 0 0 0 0 0 0 0
-1.7735 -1.4068 -3.3612 H 0 0 0 0 0 0 0 0 0 0 0 0
-3.4213 -0.7993 -3.3235 H 0 0 0 0 0 0 0 0 0 0 0 0
-0.5752 0.6691 -0.4168 H 0 0 0 0 0 0 0 0 0 0 0 0
-0.2405 -1.9966 -1.8821 H 0 0 0 0 0 0 0 0 0 0 0 0
0.5562 -0.4730 -2.2683 H 0 0 0 0 0 0 0 0 0 0 0 0
1.7547 -0.5267 -0.1367 H 0 0 0 0 0 0 0 0 0 0 0 0
2.0097 -2.0097 -1.0382 H 0 0 0 0 0 0 0 0 0 0 0 0
0.2405 -3.1668 0.2511 H 0 0 0 0 0 0 0 0 0 0 0 0
14 38 1 6
16 20 2 0
25 24 1 0
24 23 1 0
14 9 1 0
14 23 1 0
6 5 1 0
20 19 1 0
19 18 2 0
18 17 1 0
17 16 1 0
5 26 1 0
21 22 1 0
9 26 1 0
5 3 1 6
14 15 1 0
9 10 1 1
23 21 1 0
5 12 1 0
16 15 1 0
12 11 1 0
10 11 1 0
8 9 1 0
26 52 1 6
7 6 1 0
3 2 1 0
20 21 1 0
2 1 1 0
3 4 2 0
8 7 1 0
23 47 1 1
26 25 1 0
12 13 2 0
8 34 1 0
8 35 1 0
7 32 1 0
7 33 1 0
25 50 1 0
25 51 1 0
24 48 1 0
24 49 1 0
15 39 1 0
15 40 1 0
6 30 1 0
6 31 1 0
21 43 1 6
10 36 1 0
10 37 1 0
19 42 1 0
18 41 1 0
22 44 1 0
22 45 1 0
22 46 1 0
1 27 1 0
1 28 1 0
1 29 1 0
M END
PDB for NP0025340 (phanginin E)HEADER PROTEIN 19-JUN-21 NONE TITLE NULL COMPND NULL SOURCE NULL KEYWDS NULL EXPDTA NULL AUTHOR Marvin REVDAT 1 19-JUN-21 0 HETATM 1 C UNK 0 3.246 -5.501 -0.342 0.00 0.00 C+0 HETATM 2 O UNK 0 2.313 -4.680 0.363 0.00 0.00 O+0 HETATM 3 C UNK 0 2.862 -3.557 0.911 0.00 0.00 C+0 HETATM 4 O UNK 0 4.029 -3.214 0.759 0.00 0.00 O+0 HETATM 5 C UNK 0 1.810 -2.753 1.673 0.00 0.00 C+0 HETATM 6 C UNK 0 2.487 -1.558 2.380 0.00 0.00 C+0 HETATM 7 C UNK 0 1.489 -0.654 3.096 0.00 0.00 C+0 HETATM 8 C UNK 0 0.269 -0.311 2.243 0.00 0.00 C+0 HETATM 9 C UNK 0 -0.372 -1.512 1.482 0.00 0.00 C+0 HETATM 10 C UNK 0 -0.960 -2.523 2.491 0.00 0.00 C+0 HETATM 11 O UNK 0 -0.003 -3.303 3.230 0.00 0.00 O+0 HETATM 12 C UNK 0 1.228 -3.628 2.769 0.00 0.00 C+0 HETATM 13 O UNK 0 1.869 -4.520 3.318 0.00 0.00 O+0 HETATM 14 C UNK 0 -1.525 -1.044 0.507 0.00 0.00 C+0 HETATM 15 C UNK 0 -2.646 -0.244 1.243 0.00 0.00 C+0 HETATM 16 C UNK 0 -3.515 0.442 0.269 0.00 0.00 C+0 HETATM 17 O UNK 0 -4.658 1.033 0.690 0.00 0.00 O+0 HETATM 18 C UNK 0 -5.202 1.623 -0.410 0.00 0.00 C+0 HETATM 19 C UNK 0 -4.410 1.415 -1.518 0.00 0.00 C+0 HETATM 20 C UNK 0 -3.310 0.640 -1.074 0.00 0.00 C+0 HETATM 21 C UNK 0 -2.130 0.082 -1.799 0.00 0.00 C+0 HETATM 22 C UNK 0 -2.575 -1.088 -2.688 0.00 0.00 C+0 HETATM 23 C UNK 0 -0.994 -0.286 -0.766 0.00 0.00 C+0 HETATM 24 C UNK 0 0.141 -1.067 -1.445 0.00 0.00 C+0 HETATM 25 C UNK 0 1.258 -1.439 -0.481 0.00 0.00 C+0 HETATM 26 C UNK 0 0.714 -2.276 0.693 0.00 0.00 C+0 HETATM 27 H UNK 0 4.054 -5.824 0.322 0.00 0.00 H+0 HETATM 28 H UNK 0 3.645 -4.965 -1.209 0.00 0.00 H+0 HETATM 29 H UNK 0 2.715 -6.388 -0.697 0.00 0.00 H+0 HETATM 30 H UNK 0 3.226 -1.912 3.111 0.00 0.00 H+0 HETATM 31 H UNK 0 3.054 -0.956 1.658 0.00 0.00 H+0 HETATM 32 H UNK 0 1.991 0.272 3.403 0.00 0.00 H+0 HETATM 33 H UNK 0 1.161 -1.131 4.027 0.00 0.00 H+0 HETATM 34 H UNK 0 -0.462 0.155 2.913 0.00 0.00 H+0 HETATM 35 H UNK 0 0.563 0.470 1.532 0.00 0.00 H+0 HETATM 36 H UNK 0 -1.578 -2.007 3.234 0.00 0.00 H+0 HETATM 37 H UNK 0 -1.613 -3.245 1.987 0.00 0.00 H+0 HETATM 38 H UNK 0 -2.003 -1.958 0.122 0.00 0.00 H+0 HETATM 39 H UNK 0 -3.241 -0.918 1.868 0.00 0.00 H+0 HETATM 40 H UNK 0 -2.226 0.528 1.893 0.00 0.00 H+0 HETATM 41 H UNK 0 -6.134 2.145 -0.243 0.00 0.00 H+0 HETATM 42 H UNK 0 -4.609 1.773 -2.518 0.00 0.00 H+0 HETATM 43 H UNK 0 -1.733 0.864 -2.460 0.00 0.00 H+0 HETATM 44 H UNK 0 -2.894 -1.951 -2.094 0.00 0.00 H+0 HETATM 45 H UNK 0 -1.774 -1.407 -3.361 0.00 0.00 H+0 HETATM 46 H UNK 0 -3.421 -0.799 -3.324 0.00 0.00 H+0 HETATM 47 H UNK 0 -0.575 0.669 -0.417 0.00 0.00 H+0 HETATM 48 H UNK 0 -0.241 -1.997 -1.882 0.00 0.00 H+0 HETATM 49 H UNK 0 0.556 -0.473 -2.268 0.00 0.00 H+0 HETATM 50 H UNK 0 1.755 -0.527 -0.137 0.00 0.00 H+0 HETATM 51 H UNK 0 2.010 -2.010 -1.038 0.00 0.00 H+0 HETATM 52 H UNK 0 0.241 -3.167 0.251 0.00 0.00 H+0 CONECT 1 2 27 28 29 CONECT 2 3 1 CONECT 3 5 2 4 CONECT 4 3 CONECT 5 6 26 3 12 CONECT 6 5 7 30 31 CONECT 7 6 8 32 33 CONECT 8 9 7 34 35 CONECT 9 14 26 10 8 CONECT 10 9 11 36 37 CONECT 11 12 10 CONECT 12 5 11 13 CONECT 13 12 CONECT 14 38 9 23 15 CONECT 15 14 16 39 40 CONECT 16 20 17 15 CONECT 17 18 16 CONECT 18 19 17 41 CONECT 19 20 18 42 CONECT 20 16 19 21 CONECT 21 22 23 20 43 CONECT 22 21 44 45 46 CONECT 23 24 14 21 47 CONECT 24 25 23 48 49 CONECT 25 24 26 50 51 CONECT 26 5 9 52 25 CONECT 27 1 CONECT 28 1 CONECT 29 1 CONECT 30 6 CONECT 31 6 CONECT 32 7 CONECT 33 7 CONECT 34 8 CONECT 35 8 CONECT 36 10 CONECT 37 10 CONECT 38 14 CONECT 39 15 CONECT 40 15 CONECT 41 18 CONECT 42 19 CONECT 43 21 CONECT 44 22 CONECT 45 22 CONECT 46 22 CONECT 47 23 CONECT 48 24 CONECT 49 24 CONECT 50 25 CONECT 51 25 CONECT 52 26 MASTER 0 0 0 0 0 0 0 0 52 0 112 0 END SMILES for NP0025340 (phanginin E)[H]C1=C([H])C2=C(O1)C([H])([H])[C@@]1([H])[C@@]([H])(C([H])([H])C([H])([H])[C@@]3([H])[C@]4(C(=O)OC([H])([H])[H])C(=O)OC([H])([H])[C@]13C([H])([H])C([H])([H])C4([H])[H])[C@@]2([H])C([H])([H])[H] INCHI for NP0025340 (phanginin E)InChI=1S/C21H26O5/c1-12-13-4-5-17-20(15(13)10-16-14(12)6-9-25-16)7-3-8-21(17,18(22)24-2)19(23)26-11-20/h6,9,12-13,15,17H,3-5,7-8,10-11H2,1-2H3/t12-,13+,15+,17-,20-,21-/m1/s1 3D Structure for NP0025340 (phanginin E) | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Synonyms | Not Available | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Chemical Formula | C21H26O5 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Average Mass | 358.4340 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Monoisotopic Mass | 358.17802 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
| IUPAC Name | methyl (1R,2S,9R,10S,13R,14R)-9-methyl-15-oxo-5,16-dioxapentacyclo[12.3.3.0^{1,13}.0^{2,10}.0^{4,8}]icosa-4(8),6-diene-14-carboxylate | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Traditional Name | methyl (1R,2S,9R,10S,13R,14R)-9-methyl-15-oxo-5,16-dioxapentacyclo[12.3.3.0^{1,13}.0^{2,10}.0^{4,8}]icosa-4(8),6-diene-14-carboxylate | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
| CAS Registry Number | Not Available | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
| SMILES | [H]C1=C([H])C2=C(O1)C([H])([H])[C@@]1([H])[C@@]([H])(C([H])([H])C([H])([H])[C@@]3([H])[C@]4(C(=O)OC([H])([H])[H])C(=O)OC([H])([H])[C@]13C([H])([H])C([H])([H])C4([H])[H])[C@@]2([H])C([H])([H])[H] | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
| InChI Identifier | InChI=1S/C21H26O5/c1-12-13-4-5-17-20(15(13)10-16-14(12)6-9-25-16)7-3-8-21(17,18(22)24-2)19(23)26-11-20/h6,9,12-13,15,17H,3-5,7-8,10-11H2,1-2H3/t12-,13+,15+,17-,20-,21-/m1/s1 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
| InChI Key | QNKSEHIPPBVETG-PCKVVBOYSA-N | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Experimental Spectra | |||||||||||||||||||||||||||||||||||||||||||||||||||||||
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| Predicted Spectra | |||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Not Available | |||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Chemical Shift Submissions | |||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Not Available | |||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Species | |||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Species of Origin |
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| Chemical Taxonomy | |||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Classification | Not classified | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Physical Properties | |||||||||||||||||||||||||||||||||||||||||||||||||||||||
| State | Not Available | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Experimental Properties |
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| Predicted Properties |
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| External Links | |||||||||||||||||||||||||||||||||||||||||||||||||||||||
| External Links | Not Available | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
| References | |||||||||||||||||||||||||||||||||||||||||||||||||||||||
| General References |
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