Np mrd loader

Record Information
Version2.0
Created at2021-01-06 01:30:27 UTC
Updated at2021-07-15 17:23:03 UTC
NP-MRD IDNP0016561
Secondary Accession NumbersNone
Natural Product Identification
Common NameMicrosporanate D
Provided ByNPAtlasNPAtlas Logo
Description Microsporanate D is found in Micromonospora. It was first documented in 2017 (PMID: 28489382).
Structure
Thumb
SynonymsNot Available
Chemical FormulaC70H102N2O22
Average Mass1323.5780 Da
Monoisotopic Mass1322.69242 Da
IUPAC Name(2S,3S,4R,6R)-6-{[(1S,5S,7Z,11Z,13S,16S,17S,18S,20S,21R,22S,23Z)-9-{[(2R,4S,5R,6R)-4-amino-5-[(methoxycarbonyl)amino]-4,6-dimethyloxan-2-yl]oxy}-5,23-dihydroxy-8,12,18,20,22-pentamethyl-25,27-dioxo-3-[(1E)-3-oxobut-1-en-1-yl]-26-oxapentacyclo[22.2.1.0^{1,6}.0^{13,22}.0^{16,21}]heptacosa-3,7,11,14,23-pentaen-17-yl]oxy}-4-{[(2S,5R,6S)-5-{[(2R,4R,5R,6S)-4-hydroxy-5-{[(2S,5R,6S)-5-hydroxy-6-methyloxan-2-yl]oxy}-6-methyloxan-2-yl]oxy}-6-methyloxan-2-yl]oxy}-2-methyloxan-3-yl acetate
Traditional Name(2S,3S,4R,6R)-6-{[(1S,5S,7Z,11Z,13S,16S,17S,18S,20S,21R,22S,23Z)-9-{[(2R,4S,5R,6R)-4-amino-5-[(methoxycarbonyl)amino]-4,6-dimethyloxan-2-yl]oxy}-5,23-dihydroxy-8,12,18,20,22-pentamethyl-25,27-dioxo-3-[(1E)-3-oxobut-1-en-1-yl]-26-oxapentacyclo[22.2.1.0^{1,6}.0^{13,22}.0^{16,21}]heptacosa-3,7,11,14,23-pentaen-17-yl]oxy}-4-{[(2S,5R,6S)-5-{[(2R,4R,5R,6S)-4-hydroxy-5-{[(2S,5R,6S)-5-hydroxy-6-methyloxan-2-yl]oxy}-6-methyloxan-2-yl]oxy}-6-methyloxan-2-yl]oxy}-2-methyloxan-3-yl acetate
CAS Registry NumberNot Available
SMILES
COC(=O)N[C@H]1[C@@H](C)O[C@H](C[C@]1(C)N)O[C@H]1C\C=C(C)/[C@@H]2C=C[C@@H]3[C@@H](O[C@H]4C[C@@H](O[C@H]5CC[C@@H](O[C@@H]6C[C@@H](O)[C@@H](O[C@H]7CC[C@@H](O)[C@H](C)O7)[C@H](C)O6)[C@H](C)O5)[C@@H](OC(C)=O)[C@H](C)O4)[C@@H](C)C[C@H](C)[C@H]3[C@]2(C)\C(O)=C2\C(=O)O[C@]3(CC(\C=C\C(C)=O)=C[C@H](O)[C@H]3\C=C1\C)C2=O
InChI Identifier
InChI=1S/C70H102N2O22/c1-32-15-21-50(89-57-31-68(12,71)63(41(10)87-57)72-67(81)82-14)33(2)26-46-48(76)27-43(17-16-36(5)73)30-70(46)65(79)58(66(80)94-70)64(78)69(13)45(32)19-18-44-59(69)34(3)25-35(4)60(44)93-56-29-52(62(40(9)86-56)88-42(11)74)91-53-24-22-51(38(7)84-53)90-55-28-49(77)61(39(8)85-55)92-54-23-20-47(75)37(6)83-54/h15-19,26-27,34-35,37-41,44-57,59-63,75-78H,20-25,28-31,71H2,1-14H3,(H,72,81)/b17-16+,32-15-,33-26-,64-58-/t34-,35-,37-,38-,39-,40-,41+,44-,45-,46+,47+,48-,49+,50-,51+,52+,53-,54-,55+,56-,57-,59+,60-,61-,62-,63-,68-,69+,70-/m0/s1
InChI KeyWXAJQYIAXRIMRT-XAHADKGSSA-N
Experimental Spectra
Not Available
Predicted Spectra
Spectrum TypeDescriptionDepositor IDDepositor OrganizationDepositorDeposition DateView
1D NMR13C NMR Spectrum (1D, 25 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 100 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 252 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 1000 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 50 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 200 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 75 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 300 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 101 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 400 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 126 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 500 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 151 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 600 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 176 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 700 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 201 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 800 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 226 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 900 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
Chemical Shift Submissions
Not Available
Species
Species of Origin
Species NameSourceReference
MicromonosporaNPAtlas
Chemical Taxonomy
ClassificationNot classified
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Predicted Properties
PropertyValueSource
logP3.68ALOGPS
logP4.23ChemAxon
logS-5.3ALOGPS
pKa (Strongest Acidic)3.42ChemAxon
pKa (Strongest Basic)9.48ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count20ChemAxon
Hydrogen Donor Count6ChemAxon
Polar Surface Area324.31 ŲChemAxon
Rotatable Bond Count16ChemAxon
Refractivity341.24 m³·mol⁻¹ChemAxon
Polarizability146.2 ųChemAxon
Number of Rings10ChemAxon
BioavailabilityNoChemAxon
Rule of FiveNoChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleYesChemAxon
External LinksNot Available
References
General References
  1. Gui C, Zhang S, Zhu X, Ding W, Huang H, Gu YC, Duan Y, Ju J: Antimicrobial Spirotetronate Metabolites from Marine-Derived Micromonospora harpali SCSIO GJ089. J Nat Prod. 2017 May 26;80(5):1594-1603. doi: 10.1021/acs.jnatprod.7b00176. Epub 2017 May 10. [PubMed:28489382 ]