NP-MRD: Showing NP-Card for Viridisamide A (NP0011984)

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Record Information

Version

2.0

Created at

2021-01-05 21:30:08 UTC

Updated at

2021-07-15 17:10:31 UTC

NP-MRD ID

NP0011984

Secondary Accession Numbers

None

Natural Product Identification

Common Name

Viridisamide A

Provided By

NPAtlas

Description

Viridisamide A belongs to the class of organic compounds known as thiazolecarboxylic acids and derivatives. These are heterocyclic compounds containing a thiazole ring which bears a carboxylic acid group (or a derivative thereof). Viridisamide A is found in Oscillatoria nigro-viridis and Oscillatoria nigro-viridis PCC 7112. Based on a literature review very few articles have been published on Viridisamide A.

Structure

MOL 3D MOL SDF 3D SDF PDB SMILES InChI


  Mrv1652306242117003D          

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M  END

     RDKit          3D

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M  END


  Mrv1652306242117003D          

 57 57  0  0  0  0            999 V2000
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   -3.9418    2.8823    0.8062 C   0  0  0  0  0  0  0  0  0  0  0  0
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   -5.0280   -0.2001    1.3016 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0367    1.5818    0.4748 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8954   -1.1354    1.0285 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0583   -2.2075   -0.9049 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7472   -0.7104   -1.7805 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5660   -1.1255   -0.8853 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.9641   -2.3640   -1.9727 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.9166   -0.7022   -2.5836 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1468   -2.1330   -0.4507 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.3265   -0.7166    1.7075 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.9154    3.5031   -0.4443 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.1670    3.5740   -2.1944 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.9632    4.6865   -1.4900 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.9640    0.8912   -3.0676 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.0510   -3.1727    1.7746 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.3747   -4.5528    0.2617 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.8852   -3.8891   -0.4487 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.5595   -3.1951   -0.8782 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.0712   -2.3213    2.8724 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.3365   -3.9272    2.0350 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.1835   -2.9391    1.2779 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.0551   -2.1717    0.0847 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.6320   -1.2858    1.6226 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  2  3  0  0  0
  3  2  1  1  0  0  0
  3  4  1  0  0  0  0
  3  5  1  0  0  0  0
  3  6  1  0  0  0  0
  6  7  1  0  0  0  0
  7  8  1  0  0  0  0
  8  9  1  0  0  0  0
  7 10  1  0  0  0  0
 10 11  2  0  0  0  0
 10 12  1  0  0  0  0
 12 13  1  0  0  0  0
 13 14  1  0  0  0  0
 14 15  2  0  0  0  0
 15 16  1  0  0  0  0
 16 17  1  0  0  0  0
 17 18  2  0  0  0  0
 17 19  1  0  0  0  0
 19 20  1  0  0  0  0
 16 21  2  0  0  0  0
 21 22  1  0  0  0  0
 13 23  1  0  0  0  0
 23 24  1  0  0  0  0
 23 25  1  0  0  0  0
 25 26  1  0  0  0  0
 22 14  1  0  0  0  0
  1 27  1  0  0  0  0
  1 28  1  0  0  0  0
  2 29  1  0  0  0  0
  4 30  1  0  0  0  0
  4 31  1  0  0  0  0
  4 32  1  0  0  0  0
  5 33  1  0  0  0  0
  5 34  1  0  0  0  0
  5 35  1  0  0  0  0
  6 36  1  0  0  0  0
  7 37  1  1  0  0  0
  8 38  1  0  0  0  0
  8 39  1  0  0  0  0
  9 40  1  0  0  0  0
  9 41  1  0  0  0  0
  9 42  1  0  0  0  0
 12 43  1  0  0  0  0
 13 44  1  1  0  0  0
 20 45  1  0  0  0  0
 20 46  1  0  0  0  0
 20 47  1  0  0  0  0
 21 48  1  0  0  0  0
 23 49  1  1  0  0  0
 24 50  1  0  0  0  0
 24 51  1  0  0  0  0
 24 52  1  0  0  0  0
 25 53  1  0  0  0  0
 25 54  1  0  0  0  0
 26 55  1  0  0  0  0
 26 56  1  0  0  0  0
 26 57  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0011984

> <DATABASE_NAME>
NP-MRD

> <SMILES>
[H]C([H])=C([H])C(N([H])[C@]([H])(C(=O)N([H])[C@]([H])(C1=NC(=C([H])S1)C(=O)OC([H])([H])[H])[C@@]([H])(C([H])([H])[H])C([H])([H])C([H])([H])[H])C([H])([H])C([H])([H])[H])(C([H])([H])[H])C([H])([H])[H]

> <INCHI_IDENTIFIER>
InChI=1S/C19H31N3O3S/c1-8-12(4)15(17-20-14(11-26-17)18(24)25-7)21-16(23)13(9-2)22-19(5,6)10-3/h10-13,15,22H,3,8-9H2,1-2,4-7H3,(H,21,23)/t12-,13-,15-/m0/s1

> <INCHI_KEY>
WHMZADUPVDOIRR-UHFFFAOYSA-N

> <FORMULA>
C19H31N3O3S

> <MOLECULAR_WEIGHT>
381.54

> <EXACT_MASS>
381.208613044

> <JCHEM_ACCEPTOR_COUNT>
4

> <JCHEM_ATOM_COUNT>
57

> <JCHEM_AVERAGE_POLARIZABILITY>
43.01673199391664

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
2

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
methyl 2-[(1S,2S)-2-methyl-1-[(2S)-2-[(2-methylbut-3-en-2-yl)amino]butanamido]butyl]-1,3-thiazole-4-carboxylate

> <ALOGPS_LOGP>
3.22

> <JCHEM_LOGP>
3.7681142103333327

> <ALOGPS_LOGS>
-5.02

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
1

> <JCHEM_PHYSIOLOGICAL_CHARGE>
1

> <JCHEM_PKA_STRONGEST_ACIDIC>
12.366009874764696

> <JCHEM_PKA_STRONGEST_BASIC>
8.645583584681555

> <JCHEM_POLAR_SURFACE_AREA>
80.32000000000001

> <JCHEM_REFRACTIVITY>
103.6263

> <JCHEM_ROTATABLE_BOND_COUNT>
11

> <JCHEM_RULE_OF_FIVE>
1

> <ALOGPS_SOLUBILITY>
3.61e-03 g/l

> <JCHEM_TRADITIONAL_IUPAC>
methyl 2-[(1S,2S)-2-methyl-1-[(2S)-2-[(2-methylbut-3-en-2-yl)amino]butanamido]butyl]-1,3-thiazole-4-carboxylate

> <JCHEM_VEBER_RULE>
0

$$$$

     RDKit          3D

 57 57  0  0  0  0  0  0  0  0999 V2000
   -5.1000    3.5274    0.8423 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.9418    2.8823    0.8062 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.0372    1.4558    0.2302 C   0  0  2  0  0  0  0  0  0  0  0  0
   -4.4654    1.7033   -1.2001 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.1778    0.8556    1.0263 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7978    0.8858    0.4201 N   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4028   -0.4238    0.2811 C   0  0  1  0  0  0  0  0  0  0  0  0
   -2.4447   -1.1410   -1.0128 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.7941   -1.2935   -1.6511 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9510   -0.4781    0.7469 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5796    0.3697    1.6276 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0089   -1.3881    0.2691 N   0  0  0  0  0  0  0  0  0  0  0  0
    1.3616   -1.3393    0.8053 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.2238   -0.5599   -0.1587 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.0850    0.4045    0.1078 N   0  0  0  0  0  0  0  0  0  0  0  0
    3.7441    0.9741   -0.8498 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.7342    2.0597   -0.5981 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.9762    2.4780    0.5581 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.4289    2.6509   -1.6355 O   0  0  0  0  0  0  0  0  0  0  0  0
    6.3791    3.6837   -1.4203 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5038    0.5313   -2.1291 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.3366   -0.6842   -1.8584 S   0  0  0  0  0  0  0  0  0  0  0  0
    1.8449   -2.6942    1.1110 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.8885   -3.6134   -0.0975 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.1224   -2.8241    1.8658 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.3165   -2.2319    1.1659 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.0262    3.0709    0.4907 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.0949    4.5521    1.2423 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0151    3.2958    1.1396 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.7801    2.7580   -1.2969 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.6142    1.5819   -1.9070 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.3638    1.1100   -1.4822 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.0847    0.9051    0.3905 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.3909    1.4486    1.9555 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.0280   -0.2001    1.3016 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0367    1.5818    0.4748 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8954   -1.1354    1.0285 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0583   -2.2075   -0.9049 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7472   -0.7104   -1.7805 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5660   -1.1255   -0.8853 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.9641   -2.3640   -1.9727 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.9166   -0.7022   -2.5836 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1468   -2.1330   -0.4507 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.3265   -0.7166    1.7075 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.9154    3.5031   -0.4443 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.1670    3.5740   -2.1944 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.9632    4.6865   -1.4900 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.9640    0.8912   -3.0676 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.0510   -3.1727    1.7746 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.3747   -4.5528    0.2617 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.8852   -3.8891   -0.4487 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.5595   -3.1951   -0.8782 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.0712   -2.3213    2.8724 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.3365   -3.9272    2.0350 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.1835   -2.9391    1.2779 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.0551   -2.1717    0.0847 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.6320   -1.2858    1.6226 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  2  3
  3  2  1  1
  3  4  1  0
  3  5  1  0
  3  6  1  0
  6  7  1  0
  7  8  1  0
  8  9  1  0
  7 10  1  0
 10 11  2  0
 10 12  1  0
 12 13  1  0
 13 14  1  0
 14 15  2  0
 15 16  1  0
 16 17  1  0
 17 18  2  0
 17 19  1  0
 19 20  1  0
 16 21  2  0
 21 22  1  0
 13 23  1  0
 23 24  1  0
 23 25  1  0
 25 26  1  0
 22 14  1  0
  1 27  1  0
  1 28  1  0
  2 29  1  0
  4 30  1  0
  4 31  1  0
  4 32  1  0
  5 33  1  0
  5 34  1  0
  5 35  1  0
  6 36  1  0
  7 37  1  1
  8 38  1  0
  8 39  1  0
  9 40  1  0
  9 41  1  0
  9 42  1  0
 12 43  1  0
 13 44  1  1
 20 45  1  0
 20 46  1  0
 20 47  1  0
 21 48  1  0
 23 49  1  1
 24 50  1  0
 24 51  1  0
 24 52  1  0
 25 53  1  0
 25 54  1  0
 26 55  1  0
 26 56  1  0
 26 57  1  0
M  END

HEADER    PROTEIN                                 24-JUN-21   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   24-JUN-21         0                                  
HETATM    1  C   UNK     0      -5.100   3.527   0.842  0.00  0.00           C+0
HETATM    2  C   UNK     0      -3.942   2.882   0.806  0.00  0.00           C+0
HETATM    3  C   UNK     0      -4.037   1.456   0.230  0.00  0.00           C+0
HETATM    4  C   UNK     0      -4.465   1.703  -1.200  0.00  0.00           C+0
HETATM    5  C   UNK     0      -5.178   0.856   1.026  0.00  0.00           C+0
HETATM    6  N   UNK     0      -2.798   0.886   0.420  0.00  0.00           N+0
HETATM    7  C   UNK     0      -2.403  -0.424   0.281  0.00  0.00           C+0
HETATM    8  C   UNK     0      -2.445  -1.141  -1.013  0.00  0.00           C+0
HETATM    9  C   UNK     0      -3.794  -1.294  -1.651  0.00  0.00           C+0
HETATM   10  C   UNK     0      -0.951  -0.478   0.747  0.00  0.00           C+0
HETATM   11  O   UNK     0      -0.580   0.370   1.628  0.00  0.00           O+0
HETATM   12  N   UNK     0      -0.009  -1.388   0.269  0.00  0.00           N+0
HETATM   13  C   UNK     0       1.362  -1.339   0.805  0.00  0.00           C+0
HETATM   14  C   UNK     0       2.224  -0.560  -0.159  0.00  0.00           C+0
HETATM   15  N   UNK     0       3.085   0.405   0.108  0.00  0.00           N+0
HETATM   16  C   UNK     0       3.744   0.974  -0.850  0.00  0.00           C+0
HETATM   17  C   UNK     0       4.734   2.060  -0.598  0.00  0.00           C+0
HETATM   18  O   UNK     0       4.976   2.478   0.558  0.00  0.00           O+0
HETATM   19  O   UNK     0       5.429   2.651  -1.636  0.00  0.00           O+0
HETATM   20  C   UNK     0       6.379   3.684  -1.420  0.00  0.00           C+0
HETATM   21  C   UNK     0       3.504   0.531  -2.129  0.00  0.00           C+0
HETATM   22  S   UNK     0       2.337  -0.684  -1.858  0.00  0.00           S+0
HETATM   23  C   UNK     0       1.845  -2.694   1.111  0.00  0.00           C+0
HETATM   24  C   UNK     0       1.889  -3.613  -0.098  0.00  0.00           C+0
HETATM   25  C   UNK     0       3.122  -2.824   1.866  0.00  0.00           C+0
HETATM   26  C   UNK     0       4.316  -2.232   1.166  0.00  0.00           C+0
HETATM   27  H   UNK     0      -6.026   3.071   0.491  0.00  0.00           H+0
HETATM   28  H   UNK     0      -5.095   4.552   1.242  0.00  0.00           H+0
HETATM   29  H   UNK     0      -3.015   3.296   1.140  0.00  0.00           H+0
HETATM   30  H   UNK     0      -4.780   2.758  -1.297  0.00  0.00           H+0
HETATM   31  H   UNK     0      -3.614   1.582  -1.907  0.00  0.00           H+0
HETATM   32  H   UNK     0      -5.364   1.110  -1.482  0.00  0.00           H+0
HETATM   33  H   UNK     0      -6.085   0.905   0.391  0.00  0.00           H+0
HETATM   34  H   UNK     0      -5.391   1.449   1.956  0.00  0.00           H+0
HETATM   35  H   UNK     0      -5.028  -0.200   1.302  0.00  0.00           H+0
HETATM   36  H   UNK     0      -2.037   1.582   0.475  0.00  0.00           H+0
HETATM   37  H   UNK     0      -2.895  -1.135   1.028  0.00  0.00           H+0
HETATM   38  H   UNK     0      -2.058  -2.208  -0.905  0.00  0.00           H+0
HETATM   39  H   UNK     0      -1.747  -0.710  -1.781  0.00  0.00           H+0
HETATM   40  H   UNK     0      -4.566  -1.125  -0.885  0.00  0.00           H+0
HETATM   41  H   UNK     0      -3.964  -2.364  -1.973  0.00  0.00           H+0
HETATM   42  H   UNK     0      -3.917  -0.702  -2.584  0.00  0.00           H+0
HETATM   43  H   UNK     0      -0.147  -2.133  -0.451  0.00  0.00           H+0
HETATM   44  H   UNK     0       1.327  -0.717   1.708  0.00  0.00           H+0
HETATM   45  H   UNK     0       6.915   3.503  -0.444  0.00  0.00           H+0
HETATM   46  H   UNK     0       7.167   3.574  -2.194  0.00  0.00           H+0
HETATM   47  H   UNK     0       5.963   4.686  -1.490  0.00  0.00           H+0
HETATM   48  H   UNK     0       3.964   0.891  -3.068  0.00  0.00           H+0
HETATM   49  H   UNK     0       1.051  -3.173   1.775  0.00  0.00           H+0
HETATM   50  H   UNK     0       2.375  -4.553   0.262  0.00  0.00           H+0
HETATM   51  H   UNK     0       0.885  -3.889  -0.449  0.00  0.00           H+0
HETATM   52  H   UNK     0       2.559  -3.195  -0.878  0.00  0.00           H+0
HETATM   53  H   UNK     0       3.071  -2.321   2.872  0.00  0.00           H+0
HETATM   54  H   UNK     0       3.337  -3.927   2.035  0.00  0.00           H+0
HETATM   55  H   UNK     0       5.184  -2.939   1.278  0.00  0.00           H+0
HETATM   56  H   UNK     0       4.055  -2.172   0.085  0.00  0.00           H+0
HETATM   57  H   UNK     0       4.632  -1.286   1.623  0.00  0.00           H+0
CONECT    1    2   27   28                                                  
CONECT    2    1    3   29                                                  
CONECT    3    2    4    5    6                                             
CONECT    4    3   30   31   32                                             
CONECT    5    3   33   34   35                                             
CONECT    6    3    7   36                                                  
CONECT    7    6    8   10   37                                             
CONECT    8    7    9   38   39                                             
CONECT    9    8   40   41   42                                             
CONECT   10    7   11   12                                                  
CONECT   11   10                                                            
CONECT   12   10   13   43                                                  
CONECT   13   12   14   23   44                                             
CONECT   14   13   15   22                                                  
CONECT   15   14   16                                                       
CONECT   16   15   17   21                                                  
CONECT   17   16   18   19                                                  
CONECT   18   17                                                            
CONECT   19   17   20                                                       
CONECT   20   19   45   46   47                                             
CONECT   21   16   22   48                                                  
CONECT   22   21   14                                                       
CONECT   23   13   24   25   49                                             
CONECT   24   23   50   51   52                                             
CONECT   25   23   26   53   54                                             
CONECT   26   25   55   56   57                                             
CONECT   27    1                                                            
CONECT   28    1                                                            
CONECT   29    2                                                            
CONECT   30    4                                                            
CONECT   31    4                                                            
CONECT   32    4                                                            
CONECT   33    5                                                            
CONECT   34    5                                                            
CONECT   35    5                                                            
CONECT   36    6                                                            
CONECT   37    7                                                            
CONECT   38    8                                                            
CONECT   39    8                                                            
CONECT   40    9                                                            
CONECT   41    9                                                            
CONECT   42    9                                                            
CONECT   43   12                                                            
CONECT   44   13                                                            
CONECT   45   20                                                            
CONECT   46   20                                                            
CONECT   47   20                                                            
CONECT   48   21                                                            
CONECT   49   23                                                            
CONECT   50   24                                                            
CONECT   51   24                                                            
CONECT   52   24                                                            
CONECT   53   25                                                            
CONECT   54   25                                                            
CONECT   55   26                                                            
CONECT   56   26                                                            
CONECT   57   26                                                            
MASTER        0    0    0    0    0    0    0    0   57    0  114    0
END

RDKit          3D

57 57  0  0  0  0  0  0  0  0999 V2000
   -5.1000    3.5274    0.8423 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.9418    2.8823    0.8062 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.0372    1.4558    0.2302 C   0  0  2  0  0  0  0  0  0  0  0  0
   -4.4654    1.7033   -1.2001 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.1778    0.8556    1.0263 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7978    0.8858    0.4201 N   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4028   -0.4238    0.2811 C   0  0  1  0  0  0  0  0  0  0  0  0
   -2.4447   -1.1410   -1.0128 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.7941   -1.2935   -1.6511 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9510   -0.4781    0.7469 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5796    0.3697    1.6276 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0089   -1.3881    0.2691 N   0  0  0  0  0  0  0  0  0  0  0  0
    1.3616   -1.3393    0.8053 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.2238   -0.5599   -0.1587 C   0  0  0  0  0  0  0  0  0  0  0  0
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    3.7441    0.9741   -0.8498 C   0  0  0  0  0  0  0  0  0  0  0  0
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    4.9762    2.4780    0.5581 O   0  0  0  0  0  0  0  0  0  0  0  0
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    3.5038    0.5313   -2.1291 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.3366   -0.6842   -1.8584 S   0  0  0  0  0  0  0  0  0  0  0  0
    1.8449   -2.6942    1.1110 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.8885   -3.6134   -0.0975 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.1224   -2.8241    1.8658 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.3165   -2.2319    1.1659 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.0262    3.0709    0.4907 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.0949    4.5521    1.2423 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0151    3.2958    1.1396 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.7801    2.7580   -1.2969 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.6142    1.5819   -1.9070 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.3638    1.1100   -1.4822 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.0847    0.9051    0.3905 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.3909    1.4486    1.9555 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.0280   -0.2001    1.3016 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0367    1.5818    0.4748 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8954   -1.1354    1.0285 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0583   -2.2075   -0.9049 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7472   -0.7104   -1.7805 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5660   -1.1255   -0.8853 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.9641   -2.3640   -1.9727 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.9166   -0.7022   -2.5836 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1468   -2.1330   -0.4507 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.3265   -0.7166    1.7075 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.9154    3.5031   -0.4443 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.1670    3.5740   -2.1944 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.9632    4.6865   -1.4900 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.9640    0.8912   -3.0676 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.0510   -3.1727    1.7746 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.3747   -4.5528    0.2617 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.8852   -3.8891   -0.4487 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.5595   -3.1951   -0.8782 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.0712   -2.3213    2.8724 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.3365   -3.9272    2.0350 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.1835   -2.9391    1.2779 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.0551   -2.1717    0.0847 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.6320   -1.2858    1.6226 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  2  3
  3  2  1  1
  3  4  1  0
  3  5  1  0
  3  6  1  0
  6  7  1  0
  7  8  1  0
  8  9  1  0
  7 10  1  0
 10 11  2  0
 10 12  1  0
 12 13  1  0
 13 14  1  0
 14 15  2  0
 15 16  1  0
 16 17  1  0
 17 18  2  0
 17 19  1  0
 19 20  1  0
 16 21  2  0
 21 22  1  0
 13 23  1  0
 23 24  1  0
 23 25  1  0
 25 26  1  0
 22 14  1  0
  1 27  1  0
  1 28  1  0
  2 29  1  0
  4 30  1  0
  4 31  1  0
  4 32  1  0
  5 33  1  0
  5 34  1  0
  5 35  1  0
  6 36  1  0
  7 37  1  1
  8 38  1  0
  8 39  1  0
  9 40  1  0
  9 41  1  0
  9 42  1  0
 12 43  1  0
 13 44  1  1
 20 45  1  0
 20 46  1  0
 20 47  1  0
 21 48  1  0
 23 49  1  1
 24 50  1  0
 24 51  1  0
 24 52  1  0
 25 53  1  0
 25 54  1  0
 26 55  1  0
 26 56  1  0
 26 57  1  0
M  END

View in JSmol View NMR Assignments

Synonyms

Value	Source
N-{1-[4-(methoxycarbonyl)-1,3-thiazol-2-yl]-2-methylbutyl}-2-[(2-methylbut-3-en-2-yl)amino]butanimidate	Generator

Chemical Formula

C₁₉H₃₁N₃O₃S

Average Mass

381.5400 Da

Monoisotopic Mass

381.20861 Da

IUPAC Name

methyl 2-[(1S,2S)-2-methyl-1-[(2S)-2-[(2-methylbut-3-en-2-yl)amino]butanamido]butyl]-1,3-thiazole-4-carboxylate

Traditional Name

methyl 2-[(1S,2S)-2-methyl-1-[(2S)-2-[(2-methylbut-3-en-2-yl)amino]butanamido]butyl]-1,3-thiazole-4-carboxylate

CAS Registry Number

Not Available

SMILES

CCC(C)C(NC(=O)C(CC)NC(C)(C)C=C)C1=NC(=CS1)C(=O)OC

InChI Identifier

InChI=1S/C19H31N3O3S/c1-8-12(4)15(17-20-14(11-26-17)18(24)25-7)21-16(23)13(9-2)22-19(5,6)10-3/h10-13,15,22H,3,8-9H2,1-2,4-7H3,(H,21,23)

InChI Key

WHMZADUPVDOIRR-UHFFFAOYSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Oscillatoria nigro-viridis	LOTUS Database	35616633
Oscillatoria nigro-viridis PCC 7112	NPAtlas	23911585

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as thiazolecarboxylic acids and derivatives. These are heterocyclic compounds containing a thiazole ring which bears a carboxylic acid group (or a derivative thereof).

Kingdom

Organic compounds

Super Class

Organoheterocyclic compounds

Class

Azoles

Sub Class

Thiazoles

Direct Parent

Thiazolecarboxylic acids and derivatives

Alternative Parents

Substituents

Thiazolecarboxylic acid or derivatives
2,4-disubstituted 1,3-thiazole
Heteroaromatic compound
Methyl ester
Carboxylic acid ester
Amino acid or derivatives
Azacycle
Organic 1,3-dipolar compound
Propargyl-type 1,3-dipolar organic compound
Secondary amine
Monocarboxylic acid or derivatives
Secondary aliphatic amine
Carboxylic acid derivative
Carboximidic acid derivative
Carboximidic acid
Organic nitrogen compound
Organic oxygen compound
Organopnictogen compound
Organic oxide
Hydrocarbon derivative
Organooxygen compound
Organonitrogen compound
Amine
Aromatic heteromonocyclic compound

Molecular Framework

Aromatic heteromonocyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	3.22	ALOGPS
logP	3.77	ChemAxon
logS	-5	ALOGPS
pKa (Strongest Acidic)	12.37	ChemAxon
pKa (Strongest Basic)	8.65	ChemAxon
Physiological Charge	1	ChemAxon
Hydrogen Acceptor Count	4	ChemAxon
Hydrogen Donor Count	2	ChemAxon
Polar Surface Area	80.32 Å²	ChemAxon
Rotatable Bond Count	11	ChemAxon
Refractivity	103.63 m³·mol⁻¹	ChemAxon
Polarizability	43.02 Å³	ChemAxon
Number of Rings	1	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

NPAtlas ID

NPA024635

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

Not Available

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

145720565

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

Showing NP-Card for Viridisamide A (NP0011984)

MOL for NP0011984 (Viridisamide A)

3D MOL for NP0011984 (Viridisamide A)

3D SDF for NP0011984 (Viridisamide A)

3D-SDF for NP0011984 (Viridisamide A)

PDB for NP0011984 (Viridisamide A)

3D PDB for NP0011984 (Viridisamide A)

SMILES for NP0011984 (Viridisamide A)

INCHI for NP0011984 (Viridisamide A)

Structure for NP0011984 (Viridisamide A)

3D Structure for NP0011984 (Viridisamide A)