Np mrd loader

Record Information
Version2.0
Created at2021-01-05 21:25:19 UTC
Updated at2021-07-15 17:10:10 UTC
NP-MRD IDNP0011861
Secondary Accession NumbersNone
Natural Product Identification
Common NameKB425796-A
Provided ByNPAtlasNPAtlas Logo
Description KB425796-A is found in Paenibacillus. KB425796-A was first documented in 2013 (PMID: 23778117). Based on a literature review very few articles have been published on KB425796-A.
Structure
Thumb
Synonyms
ValueSource
2-[(6S,9S,15S,21S,24S,31S,34S,37S,42AS)-31-(3-aminopropyl)-1,4,7,10,13,16,19,22,29,32,35-undecahydroxy-9-[(5-hydroxy-1H-indol-3-yl)methyl]-6-{3-[(C-hydroxycarbonimidoyl)amino]propyl}-34-[(1H-imidazol-5-yl)methyl]-15-[(1H-indol-3-yl)methyl]-27-(10-methylundecyl)-25,38-dioxo-21,37-bis(propan-2-yl)-3H,6H,9H,12H,15H,18H,21H,24H,25H,27H,28H,31H,34H,37H,38H,40H,41H,42H,42ah-pyrrolo[2,1-{]1-oxa-4,7,10,13,16,19,22,25,28,31,34,37-dodecaazacyclotetracontan-24-yl]acetateGenerator
Chemical FormulaC79H115N19O18
Average Mass1618.9040 Da
Monoisotopic Mass1617.86675 Da
IUPAC Name2-[(6S,9S,15S,21S,24S,27S,31S,34S,37S,42aS)-31-(3-aminopropyl)-6-[3-(carbamoylamino)propyl]-9-[(5-hydroxy-1H-indol-3-yl)methyl]-34-[(1H-imidazol-5-yl)methyl]-15-[(1H-indol-3-yl)methyl]-27-(10-methylundecyl)-1,4,7,10,13,16,19,22,25,29,32,35,38-tridecaoxo-21,37-bis(propan-2-yl)-tetracontahydro-1H-pyrrolo[2,1-{]1-oxa-4,7,10,13,16,19,22,25,28,31,34,37-dodecaazacyclotetracontan-24-yl]acetic acid
Traditional Name[(6S,9S,15S,21S,24S,27S,31S,34S,37S,42aS)-31-(3-aminopropyl)-6-[3-(carbamoylamino)propyl]-9-[(5-hydroxy-1H-indol-3-yl)methyl]-34-(3H-imidazol-4-ylmethyl)-15-(1H-indol-3-ylmethyl)-21,37-diisopropyl-27-(10-methylundecyl)-1,4,7,10,13,16,19,22,25,29,32,35,38-tridecaoxo-octacosahydropyrrolo[2,1-{]1-oxa-4,7,10,13,16,19,22,25,28,31,34,37-dodecaazacyclotetracontan-24-yl]acetic acid
CAS Registry NumberNot Available
SMILES
CC(C)CCCCCCCCCC1CC(=O)N[C@@H](CCCN)C(=O)N[C@@H](CC2=CN=CN2)C(=O)N[C@@H](C(C)C)C(=O)N2CCC[C@H]2C(=O)NCC(=O)N[C@@H](CCCNC(N)=O)C(=O)N[C@@H](CC2=CNC3=C2C=C(O)C=C3)C(=O)NCC(=O)N[C@@H](CC2=CNC3=CC=CC=C23)C(=O)NCC(=O)N[C@@H](C(C)C)C(=O)N[C@@H](CC(O)=O)C(=O)O1
InChI Identifier
InChI=1S/C79H115N19O18/c1-44(2)19-12-10-8-7-9-11-13-20-51-35-63(100)90-56(23-16-28-80)72(108)94-60(33-49-39-82-43-89-49)74(110)97-69(46(5)6)77(113)98-30-18-25-62(98)75(111)88-41-64(101)91-57(24-17-29-83-79(81)115)73(109)93-59(32-48-38-85-55-27-26-50(99)34-53(48)55)71(107)86-40-65(102)92-58(31-47-37-84-54-22-15-14-21-52(47)54)70(106)87-42-66(103)96-68(45(3)4)76(112)95-61(36-67(104)105)78(114)116-51/h14-15,21-22,26-27,34,37-39,43-46,51,56-62,68-69,84-85,99H,7-13,16-20,23-25,28-33,35-36,40-42,80H2,1-6H3,(H,82,89)(H,86,107)(H,87,106)(H,88,111)(H,90,100)(H,91,101)(H,92,102)(H,93,109)(H,94,108)(H,95,112)(H,96,103)(H,97,110)(H,104,105)(H3,81,83,115)/t51?,56-,57-,58-,59-,60-,61-,62-,68-,69-/m0/s1
InChI KeyJHVZOPAAIYXZCE-LGJLPRRQSA-N
Experimental Spectra
Not Available
Predicted Spectra
Spectrum TypeDescriptionDepositor IDDepositor OrganizationDepositorDeposition DateView
1D NMR13C NMR Spectrum (1D, 25 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 100 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 252 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 1000 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 50 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 200 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 75 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 300 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 101 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 400 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 126 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 500 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 151 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 600 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 176 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 700 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 201 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 800 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 226 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 900 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
Chemical Shift Submissions
Not Available
Species
Species of Origin
Species NameSourceReference
PaenibacillusNPAtlas
Chemical Taxonomy
ClassificationNot classified
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Predicted Properties
PropertyValueSource
logP-3.2ChemAxon
pKa (Strongest Acidic)3.81ChemAxon
pKa (Strongest Basic)9.87ChemAxon
Physiological Charge1ChemAxon
Hydrogen Acceptor Count19ChemAxon
Hydrogen Donor Count19ChemAxon
Polar Surface Area565.64 ŲChemAxon
Rotatable Bond Count27ChemAxon
Refractivity420.75 m³·mol⁻¹ChemAxon
Polarizability171.84 ųChemAxon
Number of Rings7ChemAxon
BioavailabilityNoChemAxon
Rule of FiveNoChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleYesChemAxon
NPAtlas IDNPA000971
HMDB IDNot Available
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FoodDB IDNot Available
KNApSAcK IDNot Available
Chemspider ID78436350
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound72197741
PDB IDNot Available
ChEBI IDNot Available
Good Scents IDNot Available
References
General References
  1. Kai H, Yamashita M, Takase S, Hashimoto M, Muramatsu H, Nakamura I, Yoshikawa K, Ezaki M, Nitta K, Watanabe M, Inamura N, Fujie A: KB425796-A, a novel antifungal antibiotic produced by Paenibacillus sp. 530603. J Antibiot (Tokyo). 2013 Aug;66(8):465-71. doi: 10.1038/ja.2013.63. Epub 2013 Jun 19. [PubMed:23778117 ]