NP-MRD: Showing NP-Card for Kimbeamide A (NP0010738)

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Record Information

Version

2.0

Created at

2021-01-05 20:36:01 UTC

Updated at

2021-07-15 17:06:56 UTC

NP-MRD ID

NP0010738

Secondary Accession Numbers

None

Natural Product Identification

Common Name

Kimbeamide A

Provided By

NPAtlas

Description

Kimbeamide A is found in Symploca. Kimbeamide A was first documented in 2012 (PMID: 22489775). Based on a literature review very few articles have been published on Kimbeamide A.

Structure

MOL 3D MOL SDF 3D SDF PDB SMILES InChI


  Mrv1652306242107403D          

 44 43  0  0  0  0            999 V2000
    6.4398    0.0563   -1.1165 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.5036    0.5986    0.2518 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.4907    0.2076    1.0509 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.7037   -0.9375    0.4916 Cl  0  0  0  0  0  0  0  0  0  0  0  0
    5.4712    1.5718    0.7246 C   0  0  2  0  0  0  0  0  0  0  0  0
    4.1109    0.9742    0.6675 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.1433    1.4742   -0.0525 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.8108    0.8614   -0.0884 C   0  0  0  0  0  0  0  0  0  0  0  0
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   -5.6494    0.7318   -0.0797 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.8550    1.7306    0.7692 C   0  0  0  0  0  0  0  0  0  0  0  0
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M  END

     RDKit          3D

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    7.4907    0.2076    1.0509 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.7037   -0.9375    0.4916 Cl  0  0  0  0  0  0  0  0  0  0  0  0
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    3.1433    1.4742   -0.0525 C   0  0  0  0  0  0  0  0  0  0  0  0
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M  END


  Mrv1652306242107403D          

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    6.5036    0.5986    0.2518 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.4907    0.2076    1.0509 C   0  0  0  0  0  0  0  0  0  0  0  0
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    3.1433    1.4742   -0.0525 C   0  0  0  0  0  0  0  0  0  0  0  0
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M  END
> <DATABASE_ID>
NP0010738

> <DATABASE_NAME>
NP-MRD

> <SMILES>
[H]N(C(=O)C(\[H])=C(/[H])\C(\[H])=C(/[H])C([H])([H])C(=C(/[H])Cl)\C([H])([H])[H])[C@]([H])(C(\[H])=C(\[H])C([H])([H])C([H])([H])C(\[H])=C(/[H])Cl)C([H])([H])[H]

> <INCHI_IDENTIFIER>
InChI=1S/C17H23Cl2NO/c1-15(14-19)10-6-5-8-12-17(21)20-16(2)11-7-3-4-9-13-18/h5-9,11-14,16H,3-4,10H2,1-2H3,(H,20,21)/b6-5+,11-7-,12-8+,13-9+,15-14+/t16-/m0/s1

> <INCHI_KEY>
VOWNHWSVEUWZQX-HUVZLFSQSA-N

> <FORMULA>
C17H23Cl2NO

> <MOLECULAR_WEIGHT>
328.28

> <EXACT_MASS>
327.1156698

> <JCHEM_ACCEPTOR_COUNT>
1

> <JCHEM_ATOM_COUNT>
44

> <JCHEM_AVERAGE_POLARIZABILITY>
36.42150476975402

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
1

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
(2E,4E,7E)-8-chloro-N-[(2S,3Z,7E)-8-chloroocta-3,7-dien-2-yl]-7-methylocta-2,4,7-trienamide

> <ALOGPS_LOGP>
5.02

> <JCHEM_LOGP>
4.8906149333333335

> <ALOGPS_LOGS>
-5.46

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
0

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA_STRONGEST_ACIDIC>
15.486568335669354

> <JCHEM_PKA_STRONGEST_BASIC>
-0.23513651785939638

> <JCHEM_POLAR_SURFACE_AREA>
29.1

> <JCHEM_REFRACTIVITY>
96.2358

> <JCHEM_ROTATABLE_BOND_COUNT>
9

> <JCHEM_RULE_OF_FIVE>
1

> <ALOGPS_SOLUBILITY>
1.13e-03 g/l

> <JCHEM_TRADITIONAL_IUPAC>
(2E,4E,7E)-8-chloro-N-[(2S,3Z,7E)-8-chloroocta-3,7-dien-2-yl]-7-methylocta-2,4,7-trienamide

> <JCHEM_VEBER_RULE>
1

$$$$

     RDKit          3D

 44 43  0  0  0  0  0  0  0  0999 V2000
    6.4398    0.0563   -1.1165 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.5036    0.5986    0.2518 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.4907    0.2076    1.0509 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.7037   -0.9375    0.4916 Cl  0  0  0  0  0  0  0  0  0  0  0  0
    5.4712    1.5718    0.7246 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.1109    0.9742    0.6675 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.1433    1.4742   -0.0525 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.8108    0.8614   -0.0884 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.8286    1.3427   -0.7999 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4842    0.7279   -0.8271 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3752    1.2756   -1.5541 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8663   -0.4302   -0.1161 N   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1968   -0.9964   -0.1854 C   0  0  1  0  0  0  0  0  0  0  0  0
   -2.0579   -2.3836   -0.7702 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8202   -0.9815    1.1372 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1015   -1.2835    1.3073 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.9905   -1.6569    0.1711 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.1337   -0.6374    0.1221 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.6494    0.7318   -0.0797 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.8550    1.7306    0.7692 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.2129    3.3329    0.3986 Cl  0  0  0  0  0  0  0  0  0  0  0  0
    5.9664   -0.9634   -1.0358 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.8204    0.6770   -1.7986 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.4536    0.0011   -1.5422 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.5324    0.6137    2.0652 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.4948    2.4785    0.0765 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.6834    1.8880    1.7641 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.8936    0.0808    1.2442 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.3253    2.3599   -0.6365 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.6427   -0.0257    0.5017 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.0556    2.2423   -1.3777 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1674   -0.9039    0.4865 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7865   -0.3393   -0.8826 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6569   -3.1412   -0.2417 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3022   -2.3174   -1.8497 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9886   -2.7379   -0.7273 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2419   -0.7210    2.0112 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5463   -1.2668    2.2976 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.4703   -1.6680   -0.7908 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.4724   -2.6200    0.4408 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.6516   -0.6829    1.1101 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.8482   -0.9872   -0.6317 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.0785    0.9344   -0.9995 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.4162    1.5204    1.6680 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  2  0
  3  4  1  0
  2  5  1  0
  5  6  1  0
  6  7  2  0
  7  8  1  0
  8  9  2  0
  9 10  1  0
 10 11  2  0
 10 12  1  0
 12 13  1  0
 13 14  1  0
 13 15  1  0
 15 16  2  0
 16 17  1  0
 17 18  1  0
 18 19  1  0
 19 20  2  0
 20 21  1  0
  1 22  1  0
  1 23  1  0
  1 24  1  0
  3 25  1  0
  5 26  1  0
  5 27  1  0
  6 28  1  0
  7 29  1  0
  8 30  1  0
  9 31  1  0
 12 32  1  0
 13 33  1  6
 14 34  1  0
 14 35  1  0
 14 36  1  0
 15 37  1  0
 16 38  1  0
 17 39  1  0
 17 40  1  0
 18 41  1  0
 18 42  1  0
 19 43  1  0
 20 44  1  0
M  END

HEADER    PROTEIN                                 24-JUN-21   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   24-JUN-21         0                                  
HETATM    1  C   UNK     0       6.440   0.056  -1.117  0.00  0.00           C+0
HETATM    2  C   UNK     0       6.504   0.599   0.252  0.00  0.00           C+0
HETATM    3  C   UNK     0       7.491   0.208   1.051  0.00  0.00           C+0
HETATM    4 Cl   UNK     0       8.704  -0.938   0.492  0.00  0.00          Cl+0
HETATM    5  C   UNK     0       5.471   1.572   0.725  0.00  0.00           C+0
HETATM    6  C   UNK     0       4.111   0.974   0.668  0.00  0.00           C+0
HETATM    7  C   UNK     0       3.143   1.474  -0.053  0.00  0.00           C+0
HETATM    8  C   UNK     0       1.811   0.861  -0.088  0.00  0.00           C+0
HETATM    9  C   UNK     0       0.829   1.343  -0.800  0.00  0.00           C+0
HETATM   10  C   UNK     0      -0.484   0.728  -0.827  0.00  0.00           C+0
HETATM   11  O   UNK     0      -1.375   1.276  -1.554  0.00  0.00           O+0
HETATM   12  N   UNK     0      -0.866  -0.430  -0.116  0.00  0.00           N+0
HETATM   13  C   UNK     0      -2.197  -0.996  -0.185  0.00  0.00           C+0
HETATM   14  C   UNK     0      -2.058  -2.384  -0.770  0.00  0.00           C+0
HETATM   15  C   UNK     0      -2.820  -0.982   1.137  0.00  0.00           C+0
HETATM   16  C   UNK     0      -4.101  -1.284   1.307  0.00  0.00           C+0
HETATM   17  C   UNK     0      -4.990  -1.657   0.171  0.00  0.00           C+0
HETATM   18  C   UNK     0      -6.134  -0.637   0.122  0.00  0.00           C+0
HETATM   19  C   UNK     0      -5.649   0.732  -0.080  0.00  0.00           C+0
HETATM   20  C   UNK     0      -5.855   1.731   0.769  0.00  0.00           C+0
HETATM   21 Cl   UNK     0      -5.213   3.333   0.399  0.00  0.00          Cl+0
HETATM   22  H   UNK     0       5.966  -0.963  -1.036  0.00  0.00           H+0
HETATM   23  H   UNK     0       5.820   0.677  -1.799  0.00  0.00           H+0
HETATM   24  H   UNK     0       7.454   0.001  -1.542  0.00  0.00           H+0
HETATM   25  H   UNK     0       7.532   0.614   2.065  0.00  0.00           H+0
HETATM   26  H   UNK     0       5.495   2.478   0.077  0.00  0.00           H+0
HETATM   27  H   UNK     0       5.683   1.888   1.764  0.00  0.00           H+0
HETATM   28  H   UNK     0       3.894   0.081   1.244  0.00  0.00           H+0
HETATM   29  H   UNK     0       3.325   2.360  -0.637  0.00  0.00           H+0
HETATM   30  H   UNK     0       1.643  -0.026   0.502  0.00  0.00           H+0
HETATM   31  H   UNK     0       1.056   2.242  -1.378  0.00  0.00           H+0
HETATM   32  H   UNK     0      -0.167  -0.904   0.487  0.00  0.00           H+0
HETATM   33  H   UNK     0      -2.787  -0.339  -0.883  0.00  0.00           H+0
HETATM   34  H   UNK     0      -2.657  -3.141  -0.242  0.00  0.00           H+0
HETATM   35  H   UNK     0      -2.302  -2.317  -1.850  0.00  0.00           H+0
HETATM   36  H   UNK     0      -0.989  -2.738  -0.727  0.00  0.00           H+0
HETATM   37  H   UNK     0      -2.242  -0.721   2.011  0.00  0.00           H+0
HETATM   38  H   UNK     0      -4.546  -1.267   2.298  0.00  0.00           H+0
HETATM   39  H   UNK     0      -4.470  -1.668  -0.791  0.00  0.00           H+0
HETATM   40  H   UNK     0      -5.472  -2.620   0.441  0.00  0.00           H+0
HETATM   41  H   UNK     0      -6.652  -0.683   1.110  0.00  0.00           H+0
HETATM   42  H   UNK     0      -6.848  -0.987  -0.632  0.00  0.00           H+0
HETATM   43  H   UNK     0      -5.079   0.934  -1.000  0.00  0.00           H+0
HETATM   44  H   UNK     0      -6.416   1.520   1.668  0.00  0.00           H+0
CONECT    1    2   22   23   24                                             
CONECT    2    1    3    5                                                  
CONECT    3    2    4   25                                                  
CONECT    4    3                                                            
CONECT    5    2    6   26   27                                             
CONECT    6    5    7   28                                                  
CONECT    7    6    8   29                                                  
CONECT    8    7    9   30                                                  
CONECT    9    8   10   31                                                  
CONECT   10    9   11   12                                                  
CONECT   11   10                                                            
CONECT   12   10   13   32                                                  
CONECT   13   12   14   15   33                                             
CONECT   14   13   34   35   36                                             
CONECT   15   13   16   37                                                  
CONECT   16   15   17   38                                                  
CONECT   17   16   18   39   40                                             
CONECT   18   17   19   41   42                                             
CONECT   19   18   20   43                                                  
CONECT   20   19   21   44                                                  
CONECT   21   20                                                            
CONECT   22    1                                                            
CONECT   23    1                                                            
CONECT   24    1                                                            
CONECT   25    3                                                            
CONECT   26    5                                                            
CONECT   27    5                                                            
CONECT   28    6                                                            
CONECT   29    7                                                            
CONECT   30    8                                                            
CONECT   31    9                                                            
CONECT   32   12                                                            
CONECT   33   13                                                            
CONECT   34   14                                                            
CONECT   35   14                                                            
CONECT   36   14                                                            
CONECT   37   15                                                            
CONECT   38   16                                                            
CONECT   39   17                                                            
CONECT   40   17                                                            
CONECT   41   18                                                            
CONECT   42   18                                                            
CONECT   43   19                                                            
CONECT   44   20                                                            
MASTER        0    0    0    0    0    0    0    0   44    0   86    0
END

RDKit          3D

44 43  0  0  0  0  0  0  0  0999 V2000
    6.4398    0.0563   -1.1165 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.5036    0.5986    0.2518 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.4907    0.2076    1.0509 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.7037   -0.9375    0.4916 Cl  0  0  0  0  0  0  0  0  0  0  0  0
    5.4712    1.5718    0.7246 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.1109    0.9742    0.6675 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.1433    1.4742   -0.0525 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.8108    0.8614   -0.0884 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.8286    1.3427   -0.7999 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4842    0.7279   -0.8271 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3752    1.2756   -1.5541 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8663   -0.4302   -0.1161 N   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1968   -0.9964   -0.1854 C   0  0  1  0  0  0  0  0  0  0  0  0
   -2.0579   -2.3836   -0.7702 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8202   -0.9815    1.1372 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1015   -1.2835    1.3073 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.9905   -1.6569    0.1711 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.1337   -0.6374    0.1221 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.6494    0.7318   -0.0797 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.8550    1.7306    0.7692 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.2129    3.3329    0.3986 Cl  0  0  0  0  0  0  0  0  0  0  0  0
    5.9664   -0.9634   -1.0358 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.8204    0.6770   -1.7986 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.4536    0.0011   -1.5422 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.5324    0.6137    2.0652 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.4948    2.4785    0.0765 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.6834    1.8880    1.7641 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.8936    0.0808    1.2442 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.3253    2.3599   -0.6365 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.6427   -0.0257    0.5017 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.0556    2.2423   -1.3777 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1674   -0.9039    0.4865 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7865   -0.3393   -0.8826 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6569   -3.1412   -0.2417 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3022   -2.3174   -1.8497 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9886   -2.7379   -0.7273 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2419   -0.7210    2.0112 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5463   -1.2668    2.2976 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.4703   -1.6680   -0.7908 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.4724   -2.6200    0.4408 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.6516   -0.6829    1.1101 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.8482   -0.9872   -0.6317 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.0785    0.9344   -0.9995 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.4162    1.5204    1.6680 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  2  0
  3  4  1  0
  2  5  1  0
  5  6  1  0
  6  7  2  0
  7  8  1  0
  8  9  2  0
  9 10  1  0
 10 11  2  0
 10 12  1  0
 12 13  1  0
 13 14  1  0
 13 15  1  0
 15 16  2  0
 16 17  1  0
 17 18  1  0
 18 19  1  0
 19 20  2  0
 20 21  1  0
  1 22  1  0
  1 23  1  0
  1 24  1  0
  3 25  1  0
  5 26  1  0
  5 27  1  0
  6 28  1  0
  7 29  1  0
  8 30  1  0
  9 31  1  0
 12 32  1  0
 13 33  1  6
 14 34  1  0
 14 35  1  0
 14 36  1  0
 15 37  1  0
 16 38  1  0
 17 39  1  0
 17 40  1  0
 18 41  1  0
 18 42  1  0
 19 43  1  0
 20 44  1  0
M  END

View in JSmol View NMR Assignments

Synonyms

Not Available

Chemical Formula

C₁₇H₂₃Cl₂NO

Average Mass

328.2800 Da

Monoisotopic Mass

327.11567 Da

IUPAC Name

(2E,4E,7E)-8-chloro-N-[(2S,3Z,7E)-8-chloroocta-3,7-dien-2-yl]-7-methylocta-2,4,7-trienamide

Traditional Name

(2E,4E,7E)-8-chloro-N-[(2S,3Z,7E)-8-chloroocta-3,7-dien-2-yl]-7-methylocta-2,4,7-trienamide

CAS Registry Number

Not Available

SMILES

C[C@H](NC(=O)\C=C\C=C\C\C(C)=C\Cl)\C=C/CC\C=C\Cl

InChI Identifier

InChI=1S/C17H23Cl2NO/c1-15(14-19)10-6-5-8-12-17(21)20-16(2)11-7-3-4-9-13-18/h5-9,11-14,16H,3-4,10H2,1-2H3,(H,20,21)/b6-5+,11-7-,12-8+,13-9+,15-14+/t16-/m0/s1

InChI Key

VOWNHWSVEUWZQX-HUVZLFSQSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Symploca	NPAtlas	22489775

Chemical Taxonomy

Classification

Not classified

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	5.02	ALOGPS
logP	4.89	ChemAxon
logS	-5.5	ALOGPS
pKa (Strongest Acidic)	15.49	ChemAxon
pKa (Strongest Basic)	-0.24	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	1	ChemAxon
Hydrogen Donor Count	1	ChemAxon
Polar Surface Area	29.1 Å²	ChemAxon
Rotatable Bond Count	9	ChemAxon
Refractivity	96.24 m³·mol⁻¹	ChemAxon
Polarizability	36.42 Å³	ChemAxon
Number of Rings	0	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	Yes	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

NPAtlas ID

NPA027329

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

27444996

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

57415038

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

Nunnery JK, Engene N, Byrum T, Cao Z, Jabba SV, Pereira AR, Matainaho T, Murray TF, Gerwick WH: Biosynthetically intriguing chlorinated lipophilic metabolites from geographically distant tropical marine cyanobacteria. J Org Chem. 2012 May 4;77(9):4198-208. doi: 10.1021/jo300160e. Epub 2012 Apr 19. [PubMed:22489775 ]

Showing NP-Card for Kimbeamide A (NP0010738)

MOL for NP0010738 (Kimbeamide A)

3D MOL for NP0010738 (Kimbeamide A)

3D SDF for NP0010738 (Kimbeamide A)

3D-SDF for NP0010738 (Kimbeamide A)

PDB for NP0010738 (Kimbeamide A)

3D PDB for NP0010738 (Kimbeamide A)

SMILES for NP0010738 (Kimbeamide A)

INCHI for NP0010738 (Kimbeamide A)

Structure for NP0010738 (Kimbeamide A)

3D Structure for NP0010738 (Kimbeamide A)