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Record Information
Version2.0
Created at2021-01-05 19:54:19 UTC
Updated at2021-07-15 17:05:52 UTC
NP-MRD IDNP0010356
Secondary Accession NumbersNone
Natural Product Identification
Common NamePlantazolicin
Provided ByNPAtlasNPAtlas Logo
Description Plantazolicin is found in Bacillus. It was first documented in 2011 (PMID: 21950656). Based on a literature review very few articles have been published on Plantazolicin A (PMID: 27619732) (PMID: 26473502) (PMID: 25424526) (PMID: 23761292) (PMID: 21568297).
Structure
Data?1621576316
Synonyms
ValueSource
(2S)-2-{[(2-{2-[2-(2-{2-[(1S,2S)-1-{[(2S,3S)-2-{[(2-{2-[2-(2-{2-[4-carbamimidamido-1-(dimethylamino)butyl]-1,3-thiazol-4-yl}-5-methyl-1,3-oxazol-4-yl)-1,3-thiazol-4-yl]-5-methyl-1,3-oxazol-4-yl}-5-methyl-1,3-oxazol-4-yl)(hydroxy)methylidene]amino}-1-hydroxy-3-methylpentylidene]amino}-2-methylbutyl]-1,3-oxazol-4-yl}-1,3-oxazol-4-yl)-1,3-oxazol-4-yl]-1,3-oxazol-4-yl}-5-methyl-4,5-dihydro-1,3-oxazol-4-yl)(hydroxy)methylidene]amino}-3-phenylpropanoateGenerator
Chemical FormulaC63H69N17O13S2
Average Mass1336.4700 Da
Monoisotopic Mass1335.47022 Da
IUPAC Name(2S)-2-{[(4S,5R)-2-{2-[2-(2-{2-[(1S,2S)-1-[(2S,3S)-2-[(2-{2-[2-(2-{2-[(1R)-4-[(diaminomethylidene)amino]-1-(dimethylamino)butyl]-1,3-thiazol-4-yl}-5-methyl-1,3-oxazol-4-yl)-1,3-thiazol-4-yl]-5-methyl-1,3-oxazol-4-yl}-5-methyl-1,3-oxazol-4-yl)formamido]-3-methylpentanamido]-2-methylbutyl]-1,3-oxazol-4-yl}-1,3-oxazol-4-yl)-1,3-oxazol-4-yl]-1,3-oxazol-4-yl}-5-methyl-4,5-dihydro-1,3-oxazol-4-yl]formamido}-3-phenylpropanoic acid
Traditional Name(2S)-2-{[(4S,5R)-2-{2-[2-(2-{2-[(1S,2S)-1-[(2S,3S)-2-[(2-{2-[2-(2-{2-[(1R)-4-[(diaminomethylidene)amino]-1-(dimethylamino)butyl]-1,3-thiazol-4-yl}-5-methyl-1,3-oxazol-4-yl)-1,3-thiazol-4-yl]-5-methyl-1,3-oxazol-4-yl}-5-methyl-1,3-oxazol-4-yl)formamido]-3-methylpentanamido]-2-methylbutyl]-1,3-oxazol-4-yl}-1,3-oxazol-4-yl)-1,3-oxazol-4-yl]-1,3-oxazol-4-yl}-5-methyl-4,5-dihydro-1,3-oxazol-4-yl]formamido}-3-phenylpropanoic acid
CAS Registry NumberNot Available
SMILES
CC[C@H](C)[C@H](NC(=O)C1=C(C)OC(=N1)C1=C(C)OC(=N1)C1=CSC(=N1)C1=C(C)OC(=N1)C1=CSC(=N1)C(CCCN=C(N)N)N(C)C)C(=O)N[C@@H]([C@@H](C)CC)C1=NC(=CO1)C1=NC(=CO1)C1=NC(=CO1)C1=NC(=CO1)C1=NC(C(C)O1)C(=O)N[C@@H](CC1=CC=CC=C1)C(O)=O
InChI Identifier
InChI=1S/C63H69N17O13S2/c1-11-28(3)43(74-51(83)46-31(6)93-59(77-46)47-32(7)91-56(78-47)41-27-95-61(73-41)48-33(8)92-57(79-48)40-26-94-60(72-40)42(80(9)10)19-16-20-66-63(64)65)49(81)75-44(29(4)12-2)58-71-38(24-89-58)54-69-36(22-87-54)52-68-37(23-86-52)53-70-39(25-88-53)55-76-45(30(5)90-55)50(82)67-35(62(84)85)21-34-17-14-13-15-18-34/h13-15,17-18,22-30,35,42-45H,11-12,16,19-21H2,1-10H3,(H,67,82)(H,74,83)(H,75,81)(H,84,85)(H4,64,65,66)/t28-,29-,30?,35-,42?,43-,44-,45?/m0/s1
InChI KeySKALCVOFYPVXLA-DUJKJIRYSA-N
Experimental Spectra
Not Available
Predicted Spectra
Spectrum TypeDescriptionDepositor IDDepositor OrganizationDepositorDeposition DateView
1D NMR13C NMR Spectrum (1D, 25 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 100 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 252 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 1000 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 50 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 200 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 75 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 300 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 101 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 400 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 126 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 500 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 151 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 600 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 176 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 700 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 201 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 800 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 226 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 900 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
Chemical Shift Submissions
Not Available
Species
Species of Origin
Species NameSourceReference
BacillusNPAtlas
Chemical Taxonomy
ClassificationNot classified
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Predicted Properties
PropertyValueSource
logP5.65ALOGPS
logP5.73ChemAxon
logS-4.7ALOGPS
pKa (Strongest Acidic)3.61ChemAxon
pKa (Strongest Basic)11.25ChemAxon
Physiological Charge1ChemAxon
Hydrogen Acceptor Count19ChemAxon
Hydrogen Donor Count6ChemAxon
Polar Surface Area421.82 ŲChemAxon
Rotatable Bond Count28ChemAxon
Refractivity411.09 m³·mol⁻¹ChemAxon
Polarizability143.15 ųChemAxon
Number of Rings11ChemAxon
BioavailabilityNoChemAxon
Rule of FiveNoChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleYesChemAxon
NPAtlas IDNPA008961
HMDB IDNot Available
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FoodDB IDNot Available
KNApSAcK IDNot Available
Chemspider ID78445675
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound101802948
PDB IDNot Available
ChEBI IDNot Available
Good Scents IDNot Available
References
General References
  1. Molohon KJ, Melby JO, Lee J, Evans BS, Dunbar KL, Bumpus SB, Kelleher NL, Mitchell DA: Structure determination and interception of biosynthetic intermediates for the plantazolicin class of highly discriminating antibiotics. ACS Chem Biol. 2011 Dec 16;6(12):1307-13. doi: 10.1021/cb200339d. Epub 2011 Oct 6. [PubMed:21950656 ]
  2. Fenner S, Wilson ZE, Ley SV: The Total Synthesis of the Bioactive Natural Product Plantazolicin A and Its Biosynthetic Precursor Plantazolicin B. Chemistry. 2016 Oct 24;22(44):15902-15912. doi: 10.1002/chem.201603157. Epub 2016 Sep 13. [PubMed:27619732 ]
  3. Wada H, Williams HE, Moody CJ: Total Synthesis of the Posttranslationally Modified Polyazole Peptide Antibiotic Plantazolicin A. Angew Chem Int Ed Engl. 2015 Dec 7;54(50):15147-51. doi: 10.1002/anie.201507062. Epub 2015 Oct 16. [PubMed:26473502 ]
  4. Wilson ZE, Fenner S, Ley SV: Total syntheses of linear polythiazole/oxazole plantazolicin A and its biosynthetic precursor plantazolicin B. Angew Chem Int Ed Engl. 2015 Jan 19;54(4):1284-8. doi: 10.1002/anie.201410063. Epub 2014 Nov 25. [PubMed:25424526 ]
  5. Banala S, Ensle P, Sussmuth RD: Total synthesis of the ribosomally synthesized linear azole-containing peptide plantazolicin A from Bacillus amyloliquefaciens. Angew Chem Int Ed Engl. 2013 Sep 2;52(36):9518-23. doi: 10.1002/anie.201302266. Epub 2013 Jun 11. [PubMed:23761292 ]
  6. Kalyon B, Helaly SE, Scholz R, Nachtigall J, Vater J, Borriss R, Sussmuth RD: Plantazolicin A and B: structure elucidation of ribosomally synthesized thiazole/oxazole peptides from Bacillus amyloliquefaciens FZB42. Org Lett. 2011 Jun 17;13(12):2996-9. doi: 10.1021/ol200809m. Epub 2011 May 13. [PubMed:21568297 ]