Showing NP-Card for Padanamide B (NP0010184)
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Version | 1.0 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Created at | 2021-01-05 19:47:35 UTC | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Updated at | 2021-07-15 17:05:23 UTC | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
NP-MRD ID | NP0010184 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Secondary Accession Numbers | None | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Natural Product Identification | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Common Name | Padanamide B | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Provided By | NPAtlas | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Description | Padanamide B is found in Streptomyces sp. It was first documented in 2011 (PMID: 21749075). Based on a literature review very few articles have been published on (2S,3S,4S)-3-hydroxy-N-[(3S)-6-hydroxy-2-oxo-2,3,4,5-tetrahydropyridin-3-yl]-4-({hydroxy[(3S)-2-[(2R,3R)-3-hydroxy-2-[(1-hydroxy-2-methoxyethylidene)amino]-4-methylpentanoyl]-1,2-diazinan-3-yl]methylidene}amino)-2-methyl-5-phenylpentanimidic acid. | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Structure | MOL for NP0010184 (Padanamide B)Mrv1652307012121313D 92 94 0 0 0 0 999 V2000 -7.0999 4.4579 -1.0699 C 0 0 0 0 0 0 0 0 0 0 0 0 -5.7586 4.7112 -1.1505 O 0 0 0 0 0 0 0 0 0 0 0 0 -4.9421 3.9453 -0.3551 C 0 0 2 0 0 0 0 0 0 0 0 0 -4.9487 2.5015 -0.6315 C 0 0 0 0 0 0 0 0 0 0 0 0 -5.6248 2.0778 -1.6016 O 0 0 0 0 0 0 0 0 0 0 0 0 -4.2304 1.5551 0.1394 N 0 0 0 0 0 0 0 0 0 0 0 0 -4.2885 0.1628 -0.2063 C 0 0 1 0 0 0 0 0 0 0 0 0 -2.9222 -0.3862 -0.3782 C 0 0 0 0 0 0 0 0 0 0 0 0 -1.9737 0.4365 -0.1750 O 0 0 0 0 0 0 0 0 0 0 0 0 -2.6255 -1.6890 -0.7330 N 0 0 0 0 0 0 0 0 0 0 0 0 -3.7073 -2.5887 -0.9780 N 0 0 1 0 0 0 0 0 0 0 0 0 -3.3388 -3.4115 -2.1264 C 0 0 1 0 0 0 0 0 0 0 0 0 -2.3792 -2.7153 -3.0625 C 0 0 1 0 0 0 0 0 0 0 0 0 -1.0759 -2.3114 -2.4013 C 0 0 2 0 0 0 0 0 0 0 0 0 -1.3386 -2.2760 -0.9184 C 0 0 1 0 0 0 0 0 0 0 0 0 -0.2499 -1.7723 -0.0947 C 0 0 0 0 0 0 0 0 0 0 0 0 -0.3500 -1.1376 0.9829 O 0 0 0 0 0 0 0 0 0 0 0 0 1.0939 -2.0115 -0.5460 N 0 0 0 0 0 0 0 0 0 0 0 0 2.2565 -1.5485 0.1954 C 0 0 1 0 0 0 0 0 0 0 0 0 3.3207 -2.5763 0.3563 C 0 0 1 0 0 0 0 0 0 0 0 0 2.8442 -3.7814 1.0771 C 0 0 0 0 0 0 0 0 0 0 0 0 2.2993 -4.8320 0.3707 C 0 0 0 0 0 0 0 0 0 0 0 0 1.8328 -5.9848 0.9892 C 0 0 0 0 0 0 0 0 0 0 0 0 1.9026 -6.1162 2.3632 C 0 0 0 0 0 0 0 0 0 0 0 0 2.4460 -5.0716 3.0788 C 0 0 0 0 0 0 0 0 0 0 0 0 2.9054 -3.9314 2.4488 C 0 0 0 0 0 0 0 0 0 0 0 0 2.7357 -0.2883 -0.4984 C 0 0 1 0 0 0 0 0 0 0 0 0 1.7317 0.6749 -0.4751 O 0 0 0 0 0 0 0 0 0 0 0 0 4.0529 0.2223 -0.0188 C 0 0 2 0 0 0 0 0 0 0 0 0 3.9554 0.5254 1.4608 C 0 0 0 0 0 0 0 0 0 0 0 0 4.3834 1.4780 -0.7339 C 0 0 0 0 0 0 0 0 0 0 0 0 3.6158 1.8996 -1.6237 O 0 0 0 0 0 0 0 0 0 0 0 0 5.5500 2.1947 -0.4187 N 0 0 0 0 0 0 0 0 0 0 0 0 5.8799 3.4243 -1.1127 C 0 0 1 0 0 0 0 0 0 0 0 0 5.9748 4.5960 -0.1684 C 0 0 2 0 0 0 0 0 0 0 0 0 6.1174 5.8534 -1.0077 C 0 0 2 0 0 0 0 0 0 0 0 0 7.3361 5.7728 -1.8690 C 0 0 0 0 0 0 0 0 0 0 0 0 7.7746 6.8300 -2.3792 O 0 0 0 0 0 0 0 0 0 0 0 0 7.9242 4.4928 -2.0548 N 0 0 0 0 0 0 0 0 0 0 0 0 7.1579 3.3229 -1.8519 C 0 0 0 0 0 0 0 0 0 0 0 0 7.6041 2.2326 -2.3155 O 0 0 0 0 0 0 0 0 0 0 0 0 -5.1179 -0.5826 0.7713 C 0 0 2 0 0 0 0 0 0 0 0 0 -6.4043 0.0187 0.7383 O 0 0 0 0 0 0 0 0 0 0 0 0 -4.6847 -0.6254 2.1850 C 0 0 2 0 0 0 0 0 0 0 0 0 -5.7502 -1.4878 2.9064 C 0 0 0 0 0 0 0 0 0 0 0 0 -4.6977 0.6905 2.9173 C 0 0 0 0 0 0 0 0 0 0 0 0 -7.4221 3.4440 -1.3327 H 0 0 0 0 0 0 0 0 0 0 0 0 -7.5490 4.7655 -0.0968 H 0 0 0 0 0 0 0 0 0 0 0 0 -7.6082 5.1243 -1.8268 H 0 0 0 0 0 0 0 0 0 0 0 0 -5.1674 4.2074 0.6996 H 0 0 0 0 0 0 0 0 0 0 0 0 -3.8970 4.3353 -0.5275 H 0 0 0 0 0 0 0 0 0 0 0 0 -3.6731 1.9345 0.9284 H 0 0 0 0 0 0 0 0 0 0 0 0 -4.8113 0.0667 -1.1940 H 0 0 0 0 0 0 0 0 0 0 0 0 -3.6752 -3.2482 -0.1497 H 0 0 0 0 0 0 0 0 0 0 0 0 -2.9780 -4.4178 -1.8332 H 0 0 0 0 0 0 0 0 0 0 0 0 -4.2714 -3.5697 -2.7094 H 0 0 0 0 0 0 0 0 0 0 0 0 -2.1076 -3.5048 -3.8283 H 0 0 0 0 0 0 0 0 0 0 0 0 -2.8550 -1.9140 -3.6292 H 0 0 0 0 0 0 0 0 0 0 0 0 -0.7900 -1.2635 -2.6889 H 0 0 0 0 0 0 0 0 0 0 0 0 -0.2508 -3.0049 -2.6545 H 0 0 0 0 0 0 0 0 0 0 0 0 -1.4335 -3.3808 -0.6319 H 0 0 0 0 0 0 0 0 0 0 0 0 1.3019 -2.5282 -1.4248 H 0 0 0 0 0 0 0 0 0 0 0 0 1.9314 -1.2087 1.2163 H 0 0 0 0 0 0 0 0 0 0 0 0 3.7135 -2.8425 -0.6641 H 0 0 0 0 0 0 0 0 0 0 0 0 4.2022 -2.1931 0.9064 H 0 0 0 0 0 0 0 0 0 0 0 0 2.2350 -4.7476 -0.7044 H 0 0 0 0 0 0 0 0 0 0 0 0 1.4053 -6.8031 0.4163 H 0 0 0 0 0 0 0 0 0 0 0 0 1.5398 -7.0151 2.8606 H 0 0 0 0 0 0 0 0 0 0 0 0 2.4998 -5.1784 4.1539 H 0 0 0 0 0 0 0 0 0 0 0 0 3.3274 -3.1289 3.0436 H 0 0 0 0 0 0 0 0 0 0 0 0 2.8446 -0.5943 -1.5857 H 0 0 0 0 0 0 0 0 0 0 0 0 1.9848 1.3619 0.2139 H 0 0 0 0 0 0 0 0 0 0 0 0 4.8929 -0.4722 -0.2351 H 0 0 0 0 0 0 0 0 0 0 0 0 4.2402 1.6001 1.6489 H 0 0 0 0 0 0 0 0 0 0 0 0 4.6049 -0.1430 2.0664 H 0 0 0 0 0 0 0 0 0 0 0 0 2.9311 0.4360 1.8680 H 0 0 0 0 0 0 0 0 0 0 0 0 6.2182 1.8746 0.3211 H 0 0 0 0 0 0 0 0 0 0 0 0 5.0838 3.6505 -1.8812 H 0 0 0 0 0 0 0 0 0 0 0 0 6.8630 4.4511 0.4770 H 0 0 0 0 0 0 0 0 0 0 0 0 5.0827 4.7316 0.4676 H 0 0 0 0 0 0 0 0 0 0 0 0 6.1993 6.7082 -0.2968 H 0 0 0 0 0 0 0 0 0 0 0 0 5.1998 5.9777 -1.5936 H 0 0 0 0 0 0 0 0 0 0 0 0 8.9301 4.4522 -2.3422 H 0 0 0 0 0 0 0 0 0 0 0 0 -5.3360 -1.6369 0.4408 H 0 0 0 0 0 0 0 0 0 0 0 0 -6.7629 -0.1735 -0.1618 H 0 0 0 0 0 0 0 0 0 0 0 0 -3.6799 -1.0681 2.3440 H 0 0 0 0 0 0 0 0 0 0 0 0 -6.7267 -1.0897 2.5746 H 0 0 0 0 0 0 0 0 0 0 0 0 -5.6671 -2.5159 2.4896 H 0 0 0 0 0 0 0 0 0 0 0 0 -5.6671 -1.4211 3.9897 H 0 0 0 0 0 0 0 0 0 0 0 0 -5.3680 1.4485 2.4942 H 0 0 0 0 0 0 0 0 0 0 0 0 -5.0663 0.4813 3.9708 H 0 0 0 0 0 0 0 0 0 0 0 0 -3.6541 1.0622 3.1046 H 0 0 0 0 0 0 0 0 0 0 0 0 1 2 1 0 0 0 0 2 3 1 0 0 0 0 3 4 1 0 0 0 0 4 5 2 0 0 0 0 4 6 1 0 0 0 0 6 7 1 0 0 0 0 7 8 1 0 0 0 0 8 9 2 0 0 0 0 8 10 1 0 0 0 0 10 11 1 0 0 0 0 11 12 1 0 0 0 0 12 13 1 0 0 0 0 13 14 1 0 0 0 0 14 15 1 0 0 0 0 15 16 1 0 0 0 0 16 17 2 0 0 0 0 16 18 1 0 0 0 0 18 19 1 0 0 0 0 19 20 1 0 0 0 0 20 21 1 0 0 0 0 21 22 2 0 0 0 0 22 23 1 0 0 0 0 23 24 2 0 0 0 0 24 25 1 0 0 0 0 25 26 2 0 0 0 0 19 27 1 0 0 0 0 27 28 1 0 0 0 0 27 29 1 0 0 0 0 29 30 1 0 0 0 0 29 31 1 0 0 0 0 31 32 2 0 0 0 0 31 33 1 0 0 0 0 33 34 1 0 0 0 0 34 35 1 0 0 0 0 35 36 1 0 0 0 0 36 37 1 0 0 0 0 37 38 2 0 0 0 0 37 39 1 0 0 0 0 39 40 1 0 0 0 0 40 41 2 0 0 0 0 7 42 1 0 0 0 0 42 43 1 0 0 0 0 42 44 1 0 0 0 0 44 45 1 0 0 0 0 44 46 1 0 0 0 0 15 10 1 0 0 0 0 26 21 1 0 0 0 0 40 34 1 0 0 0 0 1 47 1 0 0 0 0 1 48 1 0 0 0 0 1 49 1 0 0 0 0 3 50 1 0 0 0 0 3 51 1 0 0 0 0 6 52 1 0 0 0 0 7 53 1 6 0 0 0 11 54 1 0 0 0 0 12 55 1 0 0 0 0 12 56 1 0 0 0 0 13 57 1 0 0 0 0 13 58 1 0 0 0 0 14 59 1 0 0 0 0 14 60 1 0 0 0 0 15 61 1 1 0 0 0 18 62 1 0 0 0 0 19 63 1 1 0 0 0 20 64 1 0 0 0 0 20 65 1 0 0 0 0 22 66 1 0 0 0 0 23 67 1 0 0 0 0 24 68 1 0 0 0 0 25 69 1 0 0 0 0 26 70 1 0 0 0 0 27 71 1 6 0 0 0 28 72 1 0 0 0 0 29 73 1 1 0 0 0 30 74 1 0 0 0 0 30 75 1 0 0 0 0 30 76 1 0 0 0 0 33 77 1 0 0 0 0 34 78 1 6 0 0 0 35 79 1 0 0 0 0 35 80 1 0 0 0 0 36 81 1 0 0 0 0 36 82 1 0 0 0 0 39 83 1 0 0 0 0 42 84 1 6 0 0 0 43 85 1 0 0 0 0 44 86 1 6 0 0 0 45 87 1 0 0 0 0 45 88 1 0 0 0 0 45 89 1 0 0 0 0 46 90 1 0 0 0 0 46 91 1 0 0 0 0 46 92 1 0 0 0 0 M END 3D MOL for NP0010184 (Padanamide B)RDKit 3D 92 94 0 0 0 0 0 0 0 0999 V2000 -7.0999 4.4579 -1.0699 C 0 0 0 0 0 0 0 0 0 0 0 0 -5.7586 4.7112 -1.1505 O 0 0 0 0 0 0 0 0 0 0 0 0 -4.9421 3.9453 -0.3551 C 0 0 0 0 0 0 0 0 0 0 0 0 -4.9487 2.5015 -0.6315 C 0 0 0 0 0 0 0 0 0 0 0 0 -5.6248 2.0778 -1.6016 O 0 0 0 0 0 0 0 0 0 0 0 0 -4.2304 1.5551 0.1394 N 0 0 0 0 0 0 0 0 0 0 0 0 -4.2885 0.1628 -0.2063 C 0 0 1 0 0 0 0 0 0 0 0 0 -2.9222 -0.3862 -0.3782 C 0 0 0 0 0 0 0 0 0 0 0 0 -1.9737 0.4365 -0.1750 O 0 0 0 0 0 0 0 0 0 0 0 0 -2.6255 -1.6890 -0.7330 N 0 0 0 0 0 0 0 0 0 0 0 0 -3.7073 -2.5887 -0.9780 N 0 0 0 0 0 0 0 0 0 0 0 0 -3.3388 -3.4115 -2.1264 C 0 0 0 0 0 0 0 0 0 0 0 0 -2.3792 -2.7153 -3.0625 C 0 0 0 0 0 0 0 0 0 0 0 0 -1.0759 -2.3114 -2.4013 C 0 0 0 0 0 0 0 0 0 0 0 0 -1.3386 -2.2760 -0.9184 C 0 0 1 0 0 0 0 0 0 0 0 0 -0.2499 -1.7723 -0.0947 C 0 0 0 0 0 0 0 0 0 0 0 0 -0.3500 -1.1376 0.9829 O 0 0 0 0 0 0 0 0 0 0 0 0 1.0939 -2.0115 -0.5460 N 0 0 0 0 0 0 0 0 0 0 0 0 2.2565 -1.5485 0.1954 C 0 0 1 0 0 0 0 0 0 0 0 0 3.3207 -2.5763 0.3563 C 0 0 0 0 0 0 0 0 0 0 0 0 2.8442 -3.7814 1.0771 C 0 0 0 0 0 0 0 0 0 0 0 0 2.2993 -4.8320 0.3707 C 0 0 0 0 0 0 0 0 0 0 0 0 1.8328 -5.9848 0.9892 C 0 0 0 0 0 0 0 0 0 0 0 0 1.9026 -6.1162 2.3632 C 0 0 0 0 0 0 0 0 0 0 0 0 2.4460 -5.0716 3.0788 C 0 0 0 0 0 0 0 0 0 0 0 0 2.9054 -3.9314 2.4488 C 0 0 0 0 0 0 0 0 0 0 0 0 2.7357 -0.2883 -0.4984 C 0 0 1 0 0 0 0 0 0 0 0 0 1.7317 0.6749 -0.4751 O 0 0 0 0 0 0 0 0 0 0 0 0 4.0529 0.2223 -0.0188 C 0 0 2 0 0 0 0 0 0 0 0 0 3.9554 0.5254 1.4608 C 0 0 0 0 0 0 0 0 0 0 0 0 4.3834 1.4780 -0.7339 C 0 0 0 0 0 0 0 0 0 0 0 0 3.6158 1.8996 -1.6237 O 0 0 0 0 0 0 0 0 0 0 0 0 5.5500 2.1947 -0.4187 N 0 0 0 0 0 0 0 0 0 0 0 0 5.8799 3.4243 -1.1127 C 0 0 1 0 0 0 0 0 0 0 0 0 5.9748 4.5960 -0.1684 C 0 0 0 0 0 0 0 0 0 0 0 0 6.1174 5.8534 -1.0077 C 0 0 0 0 0 0 0 0 0 0 0 0 7.3361 5.7728 -1.8690 C 0 0 0 0 0 0 0 0 0 0 0 0 7.7746 6.8300 -2.3792 O 0 0 0 0 0 0 0 0 0 0 0 0 7.9242 4.4928 -2.0548 N 0 0 0 0 0 0 0 0 0 0 0 0 7.1579 3.3229 -1.8519 C 0 0 0 0 0 0 0 0 0 0 0 0 7.6041 2.2326 -2.3155 O 0 0 0 0 0 0 0 0 0 0 0 0 -5.1179 -0.5826 0.7713 C 0 0 2 0 0 0 0 0 0 0 0 0 -6.4043 0.0187 0.7383 O 0 0 0 0 0 0 0 0 0 0 0 0 -4.6847 -0.6254 2.1850 C 0 0 2 0 0 0 0 0 0 0 0 0 -5.7502 -1.4878 2.9064 C 0 0 0 0 0 0 0 0 0 0 0 0 -4.6977 0.6905 2.9173 C 0 0 0 0 0 0 0 0 0 0 0 0 -7.4221 3.4440 -1.3327 H 0 0 0 0 0 0 0 0 0 0 0 0 -7.5490 4.7655 -0.0968 H 0 0 0 0 0 0 0 0 0 0 0 0 -7.6082 5.1243 -1.8268 H 0 0 0 0 0 0 0 0 0 0 0 0 -5.1674 4.2074 0.6996 H 0 0 0 0 0 0 0 0 0 0 0 0 -3.8970 4.3353 -0.5275 H 0 0 0 0 0 0 0 0 0 0 0 0 -3.6731 1.9345 0.9284 H 0 0 0 0 0 0 0 0 0 0 0 0 -4.8113 0.0667 -1.1940 H 0 0 0 0 0 0 0 0 0 0 0 0 -3.6752 -3.2482 -0.1497 H 0 0 0 0 0 0 0 0 0 0 0 0 -2.9780 -4.4178 -1.8332 H 0 0 0 0 0 0 0 0 0 0 0 0 -4.2714 -3.5697 -2.7094 H 0 0 0 0 0 0 0 0 0 0 0 0 -2.1076 -3.5048 -3.8283 H 0 0 0 0 0 0 0 0 0 0 0 0 -2.8550 -1.9140 -3.6292 H 0 0 0 0 0 0 0 0 0 0 0 0 -0.7900 -1.2635 -2.6889 H 0 0 0 0 0 0 0 0 0 0 0 0 -0.2508 -3.0049 -2.6545 H 0 0 0 0 0 0 0 0 0 0 0 0 -1.4335 -3.3808 -0.6319 H 0 0 0 0 0 0 0 0 0 0 0 0 1.3019 -2.5282 -1.4248 H 0 0 0 0 0 0 0 0 0 0 0 0 1.9314 -1.2087 1.2163 H 0 0 0 0 0 0 0 0 0 0 0 0 3.7135 -2.8425 -0.6641 H 0 0 0 0 0 0 0 0 0 0 0 0 4.2022 -2.1931 0.9064 H 0 0 0 0 0 0 0 0 0 0 0 0 2.2350 -4.7476 -0.7044 H 0 0 0 0 0 0 0 0 0 0 0 0 1.4053 -6.8031 0.4163 H 0 0 0 0 0 0 0 0 0 0 0 0 1.5398 -7.0151 2.8606 H 0 0 0 0 0 0 0 0 0 0 0 0 2.4998 -5.1784 4.1539 H 0 0 0 0 0 0 0 0 0 0 0 0 3.3274 -3.1289 3.0436 H 0 0 0 0 0 0 0 0 0 0 0 0 2.8446 -0.5943 -1.5857 H 0 0 0 0 0 0 0 0 0 0 0 0 1.9848 1.3619 0.2139 H 0 0 0 0 0 0 0 0 0 0 0 0 4.8929 -0.4722 -0.2351 H 0 0 0 0 0 0 0 0 0 0 0 0 4.2402 1.6001 1.6489 H 0 0 0 0 0 0 0 0 0 0 0 0 4.6049 -0.1430 2.0664 H 0 0 0 0 0 0 0 0 0 0 0 0 2.9311 0.4360 1.8680 H 0 0 0 0 0 0 0 0 0 0 0 0 6.2182 1.8746 0.3211 H 0 0 0 0 0 0 0 0 0 0 0 0 5.0838 3.6505 -1.8812 H 0 0 0 0 0 0 0 0 0 0 0 0 6.8630 4.4511 0.4770 H 0 0 0 0 0 0 0 0 0 0 0 0 5.0827 4.7316 0.4676 H 0 0 0 0 0 0 0 0 0 0 0 0 6.1993 6.7082 -0.2968 H 0 0 0 0 0 0 0 0 0 0 0 0 5.1998 5.9777 -1.5936 H 0 0 0 0 0 0 0 0 0 0 0 0 8.9301 4.4522 -2.3422 H 0 0 0 0 0 0 0 0 0 0 0 0 -5.3360 -1.6369 0.4408 H 0 0 0 0 0 0 0 0 0 0 0 0 -6.7629 -0.1735 -0.1618 H 0 0 0 0 0 0 0 0 0 0 0 0 -3.6799 -1.0681 2.3440 H 0 0 0 0 0 0 0 0 0 0 0 0 -6.7267 -1.0897 2.5746 H 0 0 0 0 0 0 0 0 0 0 0 0 -5.6671 -2.5159 2.4896 H 0 0 0 0 0 0 0 0 0 0 0 0 -5.6671 -1.4211 3.9897 H 0 0 0 0 0 0 0 0 0 0 0 0 -5.3680 1.4485 2.4942 H 0 0 0 0 0 0 0 0 0 0 0 0 -5.0663 0.4813 3.9708 H 0 0 0 0 0 0 0 0 0 0 0 0 -3.6541 1.0622 3.1046 H 0 0 0 0 0 0 0 0 0 0 0 0 1 2 1 0 2 3 1 0 3 4 1 0 4 5 2 0 4 6 1 0 6 7 1 0 7 8 1 0 8 9 2 0 8 10 1 0 10 11 1 0 11 12 1 0 12 13 1 0 13 14 1 0 14 15 1 0 15 16 1 0 16 17 2 0 16 18 1 0 18 19 1 0 19 20 1 0 20 21 1 0 21 22 2 0 22 23 1 0 23 24 2 0 24 25 1 0 25 26 2 0 19 27 1 0 27 28 1 0 27 29 1 0 29 30 1 0 29 31 1 0 31 32 2 0 31 33 1 0 33 34 1 0 34 35 1 0 35 36 1 0 36 37 1 0 37 38 2 0 37 39 1 0 39 40 1 0 40 41 2 0 7 42 1 0 42 43 1 0 42 44 1 0 44 45 1 0 44 46 1 0 15 10 1 0 26 21 1 0 40 34 1 0 1 47 1 0 1 48 1 0 1 49 1 0 3 50 1 0 3 51 1 0 6 52 1 0 7 53 1 6 11 54 1 0 12 55 1 0 12 56 1 0 13 57 1 0 13 58 1 0 14 59 1 0 14 60 1 0 15 61 1 1 18 62 1 0 19 63 1 1 20 64 1 0 20 65 1 0 22 66 1 0 23 67 1 0 24 68 1 0 25 69 1 0 26 70 1 0 27 71 1 6 28 72 1 0 29 73 1 1 30 74 1 0 30 75 1 0 30 76 1 0 33 77 1 0 34 78 1 6 35 79 1 0 35 80 1 0 36 81 1 0 36 82 1 0 39 83 1 0 42 84 1 6 43 85 1 0 44 86 1 6 45 87 1 0 45 88 1 0 45 89 1 0 46 90 1 0 46 91 1 0 46 92 1 0 M END 3D SDF for NP0010184 (Padanamide B)Mrv1652307012121313D 92 94 0 0 0 0 999 V2000 -7.0999 4.4579 -1.0699 C 0 0 0 0 0 0 0 0 0 0 0 0 -5.7586 4.7112 -1.1505 O 0 0 0 0 0 0 0 0 0 0 0 0 -4.9421 3.9453 -0.3551 C 0 0 2 0 0 0 0 0 0 0 0 0 -4.9487 2.5015 -0.6315 C 0 0 0 0 0 0 0 0 0 0 0 0 -5.6248 2.0778 -1.6016 O 0 0 0 0 0 0 0 0 0 0 0 0 -4.2304 1.5551 0.1394 N 0 0 0 0 0 0 0 0 0 0 0 0 -4.2885 0.1628 -0.2063 C 0 0 1 0 0 0 0 0 0 0 0 0 -2.9222 -0.3862 -0.3782 C 0 0 0 0 0 0 0 0 0 0 0 0 -1.9737 0.4365 -0.1750 O 0 0 0 0 0 0 0 0 0 0 0 0 -2.6255 -1.6890 -0.7330 N 0 0 0 0 0 0 0 0 0 0 0 0 -3.7073 -2.5887 -0.9780 N 0 0 1 0 0 0 0 0 0 0 0 0 -3.3388 -3.4115 -2.1264 C 0 0 1 0 0 0 0 0 0 0 0 0 -2.3792 -2.7153 -3.0625 C 0 0 1 0 0 0 0 0 0 0 0 0 -1.0759 -2.3114 -2.4013 C 0 0 2 0 0 0 0 0 0 0 0 0 -1.3386 -2.2760 -0.9184 C 0 0 1 0 0 0 0 0 0 0 0 0 -0.2499 -1.7723 -0.0947 C 0 0 0 0 0 0 0 0 0 0 0 0 -0.3500 -1.1376 0.9829 O 0 0 0 0 0 0 0 0 0 0 0 0 1.0939 -2.0115 -0.5460 N 0 0 0 0 0 0 0 0 0 0 0 0 2.2565 -1.5485 0.1954 C 0 0 1 0 0 0 0 0 0 0 0 0 3.3207 -2.5763 0.3563 C 0 0 1 0 0 0 0 0 0 0 0 0 2.8442 -3.7814 1.0771 C 0 0 0 0 0 0 0 0 0 0 0 0 2.2993 -4.8320 0.3707 C 0 0 0 0 0 0 0 0 0 0 0 0 1.8328 -5.9848 0.9892 C 0 0 0 0 0 0 0 0 0 0 0 0 1.9026 -6.1162 2.3632 C 0 0 0 0 0 0 0 0 0 0 0 0 2.4460 -5.0716 3.0788 C 0 0 0 0 0 0 0 0 0 0 0 0 2.9054 -3.9314 2.4488 C 0 0 0 0 0 0 0 0 0 0 0 0 2.7357 -0.2883 -0.4984 C 0 0 1 0 0 0 0 0 0 0 0 0 1.7317 0.6749 -0.4751 O 0 0 0 0 0 0 0 0 0 0 0 0 4.0529 0.2223 -0.0188 C 0 0 2 0 0 0 0 0 0 0 0 0 3.9554 0.5254 1.4608 C 0 0 0 0 0 0 0 0 0 0 0 0 4.3834 1.4780 -0.7339 C 0 0 0 0 0 0 0 0 0 0 0 0 3.6158 1.8996 -1.6237 O 0 0 0 0 0 0 0 0 0 0 0 0 5.5500 2.1947 -0.4187 N 0 0 0 0 0 0 0 0 0 0 0 0 5.8799 3.4243 -1.1127 C 0 0 1 0 0 0 0 0 0 0 0 0 5.9748 4.5960 -0.1684 C 0 0 2 0 0 0 0 0 0 0 0 0 6.1174 5.8534 -1.0077 C 0 0 2 0 0 0 0 0 0 0 0 0 7.3361 5.7728 -1.8690 C 0 0 0 0 0 0 0 0 0 0 0 0 7.7746 6.8300 -2.3792 O 0 0 0 0 0 0 0 0 0 0 0 0 7.9242 4.4928 -2.0548 N 0 0 0 0 0 0 0 0 0 0 0 0 7.1579 3.3229 -1.8519 C 0 0 0 0 0 0 0 0 0 0 0 0 7.6041 2.2326 -2.3155 O 0 0 0 0 0 0 0 0 0 0 0 0 -5.1179 -0.5826 0.7713 C 0 0 2 0 0 0 0 0 0 0 0 0 -6.4043 0.0187 0.7383 O 0 0 0 0 0 0 0 0 0 0 0 0 -4.6847 -0.6254 2.1850 C 0 0 2 0 0 0 0 0 0 0 0 0 -5.7502 -1.4878 2.9064 C 0 0 0 0 0 0 0 0 0 0 0 0 -4.6977 0.6905 2.9173 C 0 0 0 0 0 0 0 0 0 0 0 0 -7.4221 3.4440 -1.3327 H 0 0 0 0 0 0 0 0 0 0 0 0 -7.5490 4.7655 -0.0968 H 0 0 0 0 0 0 0 0 0 0 0 0 -7.6082 5.1243 -1.8268 H 0 0 0 0 0 0 0 0 0 0 0 0 -5.1674 4.2074 0.6996 H 0 0 0 0 0 0 0 0 0 0 0 0 -3.8970 4.3353 -0.5275 H 0 0 0 0 0 0 0 0 0 0 0 0 -3.6731 1.9345 0.9284 H 0 0 0 0 0 0 0 0 0 0 0 0 -4.8113 0.0667 -1.1940 H 0 0 0 0 0 0 0 0 0 0 0 0 -3.6752 -3.2482 -0.1497 H 0 0 0 0 0 0 0 0 0 0 0 0 -2.9780 -4.4178 -1.8332 H 0 0 0 0 0 0 0 0 0 0 0 0 -4.2714 -3.5697 -2.7094 H 0 0 0 0 0 0 0 0 0 0 0 0 -2.1076 -3.5048 -3.8283 H 0 0 0 0 0 0 0 0 0 0 0 0 -2.8550 -1.9140 -3.6292 H 0 0 0 0 0 0 0 0 0 0 0 0 -0.7900 -1.2635 -2.6889 H 0 0 0 0 0 0 0 0 0 0 0 0 -0.2508 -3.0049 -2.6545 H 0 0 0 0 0 0 0 0 0 0 0 0 -1.4335 -3.3808 -0.6319 H 0 0 0 0 0 0 0 0 0 0 0 0 1.3019 -2.5282 -1.4248 H 0 0 0 0 0 0 0 0 0 0 0 0 1.9314 -1.2087 1.2163 H 0 0 0 0 0 0 0 0 0 0 0 0 3.7135 -2.8425 -0.6641 H 0 0 0 0 0 0 0 0 0 0 0 0 4.2022 -2.1931 0.9064 H 0 0 0 0 0 0 0 0 0 0 0 0 2.2350 -4.7476 -0.7044 H 0 0 0 0 0 0 0 0 0 0 0 0 1.4053 -6.8031 0.4163 H 0 0 0 0 0 0 0 0 0 0 0 0 1.5398 -7.0151 2.8606 H 0 0 0 0 0 0 0 0 0 0 0 0 2.4998 -5.1784 4.1539 H 0 0 0 0 0 0 0 0 0 0 0 0 3.3274 -3.1289 3.0436 H 0 0 0 0 0 0 0 0 0 0 0 0 2.8446 -0.5943 -1.5857 H 0 0 0 0 0 0 0 0 0 0 0 0 1.9848 1.3619 0.2139 H 0 0 0 0 0 0 0 0 0 0 0 0 4.8929 -0.4722 -0.2351 H 0 0 0 0 0 0 0 0 0 0 0 0 4.2402 1.6001 1.6489 H 0 0 0 0 0 0 0 0 0 0 0 0 4.6049 -0.1430 2.0664 H 0 0 0 0 0 0 0 0 0 0 0 0 2.9311 0.4360 1.8680 H 0 0 0 0 0 0 0 0 0 0 0 0 6.2182 1.8746 0.3211 H 0 0 0 0 0 0 0 0 0 0 0 0 5.0838 3.6505 -1.8812 H 0 0 0 0 0 0 0 0 0 0 0 0 6.8630 4.4511 0.4770 H 0 0 0 0 0 0 0 0 0 0 0 0 5.0827 4.7316 0.4676 H 0 0 0 0 0 0 0 0 0 0 0 0 6.1993 6.7082 -0.2968 H 0 0 0 0 0 0 0 0 0 0 0 0 5.1998 5.9777 -1.5936 H 0 0 0 0 0 0 0 0 0 0 0 0 8.9301 4.4522 -2.3422 H 0 0 0 0 0 0 0 0 0 0 0 0 -5.3360 -1.6369 0.4408 H 0 0 0 0 0 0 0 0 0 0 0 0 -6.7629 -0.1735 -0.1618 H 0 0 0 0 0 0 0 0 0 0 0 0 -3.6799 -1.0681 2.3440 H 0 0 0 0 0 0 0 0 0 0 0 0 -6.7267 -1.0897 2.5746 H 0 0 0 0 0 0 0 0 0 0 0 0 -5.6671 -2.5159 2.4896 H 0 0 0 0 0 0 0 0 0 0 0 0 -5.6671 -1.4211 3.9897 H 0 0 0 0 0 0 0 0 0 0 0 0 -5.3680 1.4485 2.4942 H 0 0 0 0 0 0 0 0 0 0 0 0 -5.0663 0.4813 3.9708 H 0 0 0 0 0 0 0 0 0 0 0 0 -3.6541 1.0622 3.1046 H 0 0 0 0 0 0 0 0 0 0 0 0 1 2 1 0 0 0 0 2 3 1 0 0 0 0 3 4 1 0 0 0 0 4 5 2 0 0 0 0 4 6 1 0 0 0 0 6 7 1 0 0 0 0 7 8 1 0 0 0 0 8 9 2 0 0 0 0 8 10 1 0 0 0 0 10 11 1 0 0 0 0 11 12 1 0 0 0 0 12 13 1 0 0 0 0 13 14 1 0 0 0 0 14 15 1 0 0 0 0 15 16 1 0 0 0 0 16 17 2 0 0 0 0 16 18 1 0 0 0 0 18 19 1 0 0 0 0 19 20 1 0 0 0 0 20 21 1 0 0 0 0 21 22 2 0 0 0 0 22 23 1 0 0 0 0 23 24 2 0 0 0 0 24 25 1 0 0 0 0 25 26 2 0 0 0 0 19 27 1 0 0 0 0 27 28 1 0 0 0 0 27 29 1 0 0 0 0 29 30 1 0 0 0 0 29 31 1 0 0 0 0 31 32 2 0 0 0 0 31 33 1 0 0 0 0 33 34 1 0 0 0 0 34 35 1 0 0 0 0 35 36 1 0 0 0 0 36 37 1 0 0 0 0 37 38 2 0 0 0 0 37 39 1 0 0 0 0 39 40 1 0 0 0 0 40 41 2 0 0 0 0 7 42 1 0 0 0 0 42 43 1 0 0 0 0 42 44 1 0 0 0 0 44 45 1 0 0 0 0 44 46 1 0 0 0 0 15 10 1 0 0 0 0 26 21 1 0 0 0 0 40 34 1 0 0 0 0 1 47 1 0 0 0 0 1 48 1 0 0 0 0 1 49 1 0 0 0 0 3 50 1 0 0 0 0 3 51 1 0 0 0 0 6 52 1 0 0 0 0 7 53 1 6 0 0 0 11 54 1 0 0 0 0 12 55 1 0 0 0 0 12 56 1 0 0 0 0 13 57 1 0 0 0 0 13 58 1 0 0 0 0 14 59 1 0 0 0 0 14 60 1 0 0 0 0 15 61 1 1 0 0 0 18 62 1 0 0 0 0 19 63 1 1 0 0 0 20 64 1 0 0 0 0 20 65 1 0 0 0 0 22 66 1 0 0 0 0 23 67 1 0 0 0 0 24 68 1 0 0 0 0 25 69 1 0 0 0 0 26 70 1 0 0 0 0 27 71 1 6 0 0 0 28 72 1 0 0 0 0 29 73 1 1 0 0 0 30 74 1 0 0 0 0 30 75 1 0 0 0 0 30 76 1 0 0 0 0 33 77 1 0 0 0 0 34 78 1 6 0 0 0 35 79 1 0 0 0 0 35 80 1 0 0 0 0 36 81 1 0 0 0 0 36 82 1 0 0 0 0 39 83 1 0 0 0 0 42 84 1 6 0 0 0 43 85 1 0 0 0 0 44 86 1 6 0 0 0 45 87 1 0 0 0 0 45 88 1 0 0 0 0 45 89 1 0 0 0 0 46 90 1 0 0 0 0 46 91 1 0 0 0 0 46 92 1 0 0 0 0 M END > <DATABASE_ID> NP0010184 > <DATABASE_NAME> NP-MRD > <SMILES> [H]O[C@@]([H])([C@@]([H])(N([H])C(=O)C([H])([H])OC([H])([H])[H])C(=O)N1N([H])C([H])([H])C([H])([H])C([H])([H])[C@@]1([H])C(=O)N([H])[C@@]([H])(C([H])([H])C1=C([H])C([H])=C([H])C([H])=C1[H])[C@@]([H])(O[H])[C@@]([H])(C(=O)N([H])[C@]1([H])C(=O)N([H])C(=O)C([H])([H])C1([H])[H])C([H])([H])[H])C([H])(C([H])([H])[H])C([H])([H])[H] > <INCHI_IDENTIFIER> InChI=1S/C31H46N6O9/c1-17(2)26(40)25(35-24(39)16-46-4)31(45)37-22(11-8-14-32-37)30(44)34-21(15-19-9-6-5-7-10-19)27(41)18(3)28(42)33-20-12-13-23(38)36-29(20)43/h5-7,9-10,17-18,20-22,25-27,32,40-41H,8,11-16H2,1-4H3,(H,33,42)(H,34,44)(H,35,39)(H,36,38,43)/t18-,20-,21-,22-,25+,26+,27-/m0/s1 > <INCHI_KEY> HVEJTNNFGWKHNS-GYNFZRGZSA-N > <FORMULA> C31H46N6O9 > <MOLECULAR_WEIGHT> 646.742 > <EXACT_MASS> 646.332627085 > <JCHEM_ACCEPTOR_COUNT> 10 > <JCHEM_ATOM_COUNT> 92 > <JCHEM_AVERAGE_POLARIZABILITY> 67.79376836353286 > <JCHEM_BIOAVAILABILITY> 0 > <JCHEM_DONOR_COUNT> 7 > <JCHEM_FORMAL_CHARGE> 0 > <JCHEM_GHOSE_FILTER> 0 > <JCHEM_IUPAC> (2S,3S,4S)-N-[(3S)-2,6-dioxopiperidin-3-yl]-3-hydroxy-4-{[(3S)-2-[(2R,3R)-3-hydroxy-2-(2-methoxyacetamido)-4-methylpentanoyl]-1,2-diazinan-3-yl]formamido}-2-methyl-5-phenylpentanamide > <ALOGPS_LOGP> -0.22 > <JCHEM_LOGP> -1.6045311580000001 > <ALOGPS_LOGS> -3.23 > <JCHEM_MDDR_LIKE_RULE> 1 > <JCHEM_NUMBER_OF_RINGS> 3 > <JCHEM_PHYSIOLOGICAL_CHARGE> 0 > <JCHEM_PKA> 11.98144735886906 > <JCHEM_PKA_STRONGEST_ACIDIC> 11.390062178065833 > <JCHEM_PKA_STRONGEST_BASIC> 3.856546767752586 > <JCHEM_POLAR_SURFACE_AREA> 215.5 > <JCHEM_REFRACTIVITY> 174.16390000000007 > <JCHEM_ROTATABLE_BOND_COUNT> 14 > <JCHEM_RULE_OF_FIVE> 0 > <ALOGPS_SOLUBILITY> 3.83e-01 g/l > <JCHEM_TRADITIONAL_IUPAC> (2S,3S,4S)-N-[(3S)-2,6-dioxopiperidin-3-yl]-3-hydroxy-4-{[(3S)-2-[(2R,3R)-3-hydroxy-2-(2-methoxyacetamido)-4-methylpentanoyl]-1,2-diazinan-3-yl]formamido}-2-methyl-5-phenylpentanamide > <JCHEM_VEBER_RULE> 0 $$$$ 3D-SDF for NP0010184 (Padanamide B)RDKit 3D 92 94 0 0 0 0 0 0 0 0999 V2000 -7.0999 4.4579 -1.0699 C 0 0 0 0 0 0 0 0 0 0 0 0 -5.7586 4.7112 -1.1505 O 0 0 0 0 0 0 0 0 0 0 0 0 -4.9421 3.9453 -0.3551 C 0 0 0 0 0 0 0 0 0 0 0 0 -4.9487 2.5015 -0.6315 C 0 0 0 0 0 0 0 0 0 0 0 0 -5.6248 2.0778 -1.6016 O 0 0 0 0 0 0 0 0 0 0 0 0 -4.2304 1.5551 0.1394 N 0 0 0 0 0 0 0 0 0 0 0 0 -4.2885 0.1628 -0.2063 C 0 0 1 0 0 0 0 0 0 0 0 0 -2.9222 -0.3862 -0.3782 C 0 0 0 0 0 0 0 0 0 0 0 0 -1.9737 0.4365 -0.1750 O 0 0 0 0 0 0 0 0 0 0 0 0 -2.6255 -1.6890 -0.7330 N 0 0 0 0 0 0 0 0 0 0 0 0 -3.7073 -2.5887 -0.9780 N 0 0 0 0 0 0 0 0 0 0 0 0 -3.3388 -3.4115 -2.1264 C 0 0 0 0 0 0 0 0 0 0 0 0 -2.3792 -2.7153 -3.0625 C 0 0 0 0 0 0 0 0 0 0 0 0 -1.0759 -2.3114 -2.4013 C 0 0 0 0 0 0 0 0 0 0 0 0 -1.3386 -2.2760 -0.9184 C 0 0 1 0 0 0 0 0 0 0 0 0 -0.2499 -1.7723 -0.0947 C 0 0 0 0 0 0 0 0 0 0 0 0 -0.3500 -1.1376 0.9829 O 0 0 0 0 0 0 0 0 0 0 0 0 1.0939 -2.0115 -0.5460 N 0 0 0 0 0 0 0 0 0 0 0 0 2.2565 -1.5485 0.1954 C 0 0 1 0 0 0 0 0 0 0 0 0 3.3207 -2.5763 0.3563 C 0 0 0 0 0 0 0 0 0 0 0 0 2.8442 -3.7814 1.0771 C 0 0 0 0 0 0 0 0 0 0 0 0 2.2993 -4.8320 0.3707 C 0 0 0 0 0 0 0 0 0 0 0 0 1.8328 -5.9848 0.9892 C 0 0 0 0 0 0 0 0 0 0 0 0 1.9026 -6.1162 2.3632 C 0 0 0 0 0 0 0 0 0 0 0 0 2.4460 -5.0716 3.0788 C 0 0 0 0 0 0 0 0 0 0 0 0 2.9054 -3.9314 2.4488 C 0 0 0 0 0 0 0 0 0 0 0 0 2.7357 -0.2883 -0.4984 C 0 0 1 0 0 0 0 0 0 0 0 0 1.7317 0.6749 -0.4751 O 0 0 0 0 0 0 0 0 0 0 0 0 4.0529 0.2223 -0.0188 C 0 0 2 0 0 0 0 0 0 0 0 0 3.9554 0.5254 1.4608 C 0 0 0 0 0 0 0 0 0 0 0 0 4.3834 1.4780 -0.7339 C 0 0 0 0 0 0 0 0 0 0 0 0 3.6158 1.8996 -1.6237 O 0 0 0 0 0 0 0 0 0 0 0 0 5.5500 2.1947 -0.4187 N 0 0 0 0 0 0 0 0 0 0 0 0 5.8799 3.4243 -1.1127 C 0 0 1 0 0 0 0 0 0 0 0 0 5.9748 4.5960 -0.1684 C 0 0 0 0 0 0 0 0 0 0 0 0 6.1174 5.8534 -1.0077 C 0 0 0 0 0 0 0 0 0 0 0 0 7.3361 5.7728 -1.8690 C 0 0 0 0 0 0 0 0 0 0 0 0 7.7746 6.8300 -2.3792 O 0 0 0 0 0 0 0 0 0 0 0 0 7.9242 4.4928 -2.0548 N 0 0 0 0 0 0 0 0 0 0 0 0 7.1579 3.3229 -1.8519 C 0 0 0 0 0 0 0 0 0 0 0 0 7.6041 2.2326 -2.3155 O 0 0 0 0 0 0 0 0 0 0 0 0 -5.1179 -0.5826 0.7713 C 0 0 2 0 0 0 0 0 0 0 0 0 -6.4043 0.0187 0.7383 O 0 0 0 0 0 0 0 0 0 0 0 0 -4.6847 -0.6254 2.1850 C 0 0 2 0 0 0 0 0 0 0 0 0 -5.7502 -1.4878 2.9064 C 0 0 0 0 0 0 0 0 0 0 0 0 -4.6977 0.6905 2.9173 C 0 0 0 0 0 0 0 0 0 0 0 0 -7.4221 3.4440 -1.3327 H 0 0 0 0 0 0 0 0 0 0 0 0 -7.5490 4.7655 -0.0968 H 0 0 0 0 0 0 0 0 0 0 0 0 -7.6082 5.1243 -1.8268 H 0 0 0 0 0 0 0 0 0 0 0 0 -5.1674 4.2074 0.6996 H 0 0 0 0 0 0 0 0 0 0 0 0 -3.8970 4.3353 -0.5275 H 0 0 0 0 0 0 0 0 0 0 0 0 -3.6731 1.9345 0.9284 H 0 0 0 0 0 0 0 0 0 0 0 0 -4.8113 0.0667 -1.1940 H 0 0 0 0 0 0 0 0 0 0 0 0 -3.6752 -3.2482 -0.1497 H 0 0 0 0 0 0 0 0 0 0 0 0 -2.9780 -4.4178 -1.8332 H 0 0 0 0 0 0 0 0 0 0 0 0 -4.2714 -3.5697 -2.7094 H 0 0 0 0 0 0 0 0 0 0 0 0 -2.1076 -3.5048 -3.8283 H 0 0 0 0 0 0 0 0 0 0 0 0 -2.8550 -1.9140 -3.6292 H 0 0 0 0 0 0 0 0 0 0 0 0 -0.7900 -1.2635 -2.6889 H 0 0 0 0 0 0 0 0 0 0 0 0 -0.2508 -3.0049 -2.6545 H 0 0 0 0 0 0 0 0 0 0 0 0 -1.4335 -3.3808 -0.6319 H 0 0 0 0 0 0 0 0 0 0 0 0 1.3019 -2.5282 -1.4248 H 0 0 0 0 0 0 0 0 0 0 0 0 1.9314 -1.2087 1.2163 H 0 0 0 0 0 0 0 0 0 0 0 0 3.7135 -2.8425 -0.6641 H 0 0 0 0 0 0 0 0 0 0 0 0 4.2022 -2.1931 0.9064 H 0 0 0 0 0 0 0 0 0 0 0 0 2.2350 -4.7476 -0.7044 H 0 0 0 0 0 0 0 0 0 0 0 0 1.4053 -6.8031 0.4163 H 0 0 0 0 0 0 0 0 0 0 0 0 1.5398 -7.0151 2.8606 H 0 0 0 0 0 0 0 0 0 0 0 0 2.4998 -5.1784 4.1539 H 0 0 0 0 0 0 0 0 0 0 0 0 3.3274 -3.1289 3.0436 H 0 0 0 0 0 0 0 0 0 0 0 0 2.8446 -0.5943 -1.5857 H 0 0 0 0 0 0 0 0 0 0 0 0 1.9848 1.3619 0.2139 H 0 0 0 0 0 0 0 0 0 0 0 0 4.8929 -0.4722 -0.2351 H 0 0 0 0 0 0 0 0 0 0 0 0 4.2402 1.6001 1.6489 H 0 0 0 0 0 0 0 0 0 0 0 0 4.6049 -0.1430 2.0664 H 0 0 0 0 0 0 0 0 0 0 0 0 2.9311 0.4360 1.8680 H 0 0 0 0 0 0 0 0 0 0 0 0 6.2182 1.8746 0.3211 H 0 0 0 0 0 0 0 0 0 0 0 0 5.0838 3.6505 -1.8812 H 0 0 0 0 0 0 0 0 0 0 0 0 6.8630 4.4511 0.4770 H 0 0 0 0 0 0 0 0 0 0 0 0 5.0827 4.7316 0.4676 H 0 0 0 0 0 0 0 0 0 0 0 0 6.1993 6.7082 -0.2968 H 0 0 0 0 0 0 0 0 0 0 0 0 5.1998 5.9777 -1.5936 H 0 0 0 0 0 0 0 0 0 0 0 0 8.9301 4.4522 -2.3422 H 0 0 0 0 0 0 0 0 0 0 0 0 -5.3360 -1.6369 0.4408 H 0 0 0 0 0 0 0 0 0 0 0 0 -6.7629 -0.1735 -0.1618 H 0 0 0 0 0 0 0 0 0 0 0 0 -3.6799 -1.0681 2.3440 H 0 0 0 0 0 0 0 0 0 0 0 0 -6.7267 -1.0897 2.5746 H 0 0 0 0 0 0 0 0 0 0 0 0 -5.6671 -2.5159 2.4896 H 0 0 0 0 0 0 0 0 0 0 0 0 -5.6671 -1.4211 3.9897 H 0 0 0 0 0 0 0 0 0 0 0 0 -5.3680 1.4485 2.4942 H 0 0 0 0 0 0 0 0 0 0 0 0 -5.0663 0.4813 3.9708 H 0 0 0 0 0 0 0 0 0 0 0 0 -3.6541 1.0622 3.1046 H 0 0 0 0 0 0 0 0 0 0 0 0 1 2 1 0 2 3 1 0 3 4 1 0 4 5 2 0 4 6 1 0 6 7 1 0 7 8 1 0 8 9 2 0 8 10 1 0 10 11 1 0 11 12 1 0 12 13 1 0 13 14 1 0 14 15 1 0 15 16 1 0 16 17 2 0 16 18 1 0 18 19 1 0 19 20 1 0 20 21 1 0 21 22 2 0 22 23 1 0 23 24 2 0 24 25 1 0 25 26 2 0 19 27 1 0 27 28 1 0 27 29 1 0 29 30 1 0 29 31 1 0 31 32 2 0 31 33 1 0 33 34 1 0 34 35 1 0 35 36 1 0 36 37 1 0 37 38 2 0 37 39 1 0 39 40 1 0 40 41 2 0 7 42 1 0 42 43 1 0 42 44 1 0 44 45 1 0 44 46 1 0 15 10 1 0 26 21 1 0 40 34 1 0 1 47 1 0 1 48 1 0 1 49 1 0 3 50 1 0 3 51 1 0 6 52 1 0 7 53 1 6 11 54 1 0 12 55 1 0 12 56 1 0 13 57 1 0 13 58 1 0 14 59 1 0 14 60 1 0 15 61 1 1 18 62 1 0 19 63 1 1 20 64 1 0 20 65 1 0 22 66 1 0 23 67 1 0 24 68 1 0 25 69 1 0 26 70 1 0 27 71 1 6 28 72 1 0 29 73 1 1 30 74 1 0 30 75 1 0 30 76 1 0 33 77 1 0 34 78 1 6 35 79 1 0 35 80 1 0 36 81 1 0 36 82 1 0 39 83 1 0 42 84 1 6 43 85 1 0 44 86 1 6 45 87 1 0 45 88 1 0 45 89 1 0 46 90 1 0 46 91 1 0 46 92 1 0 M END PDB for NP0010184 (Padanamide B)HEADER PROTEIN 01-JUL-21 NONE TITLE NULL COMPND NULL SOURCE NULL KEYWDS NULL EXPDTA NULL AUTHOR Marvin REVDAT 1 01-JUL-21 0 HETATM 1 C UNK 0 -7.100 4.458 -1.070 0.00 0.00 C+0 HETATM 2 O UNK 0 -5.759 4.711 -1.151 0.00 0.00 O+0 HETATM 3 C UNK 0 -4.942 3.945 -0.355 0.00 0.00 C+0 HETATM 4 C UNK 0 -4.949 2.502 -0.632 0.00 0.00 C+0 HETATM 5 O UNK 0 -5.625 2.078 -1.602 0.00 0.00 O+0 HETATM 6 N UNK 0 -4.230 1.555 0.139 0.00 0.00 N+0 HETATM 7 C UNK 0 -4.289 0.163 -0.206 0.00 0.00 C+0 HETATM 8 C UNK 0 -2.922 -0.386 -0.378 0.00 0.00 C+0 HETATM 9 O UNK 0 -1.974 0.437 -0.175 0.00 0.00 O+0 HETATM 10 N UNK 0 -2.626 -1.689 -0.733 0.00 0.00 N+0 HETATM 11 N UNK 0 -3.707 -2.589 -0.978 0.00 0.00 N+0 HETATM 12 C UNK 0 -3.339 -3.412 -2.126 0.00 0.00 C+0 HETATM 13 C UNK 0 -2.379 -2.715 -3.063 0.00 0.00 C+0 HETATM 14 C UNK 0 -1.076 -2.311 -2.401 0.00 0.00 C+0 HETATM 15 C UNK 0 -1.339 -2.276 -0.918 0.00 0.00 C+0 HETATM 16 C UNK 0 -0.250 -1.772 -0.095 0.00 0.00 C+0 HETATM 17 O UNK 0 -0.350 -1.138 0.983 0.00 0.00 O+0 HETATM 18 N UNK 0 1.094 -2.011 -0.546 0.00 0.00 N+0 HETATM 19 C UNK 0 2.256 -1.549 0.195 0.00 0.00 C+0 HETATM 20 C UNK 0 3.321 -2.576 0.356 0.00 0.00 C+0 HETATM 21 C UNK 0 2.844 -3.781 1.077 0.00 0.00 C+0 HETATM 22 C UNK 0 2.299 -4.832 0.371 0.00 0.00 C+0 HETATM 23 C UNK 0 1.833 -5.985 0.989 0.00 0.00 C+0 HETATM 24 C UNK 0 1.903 -6.116 2.363 0.00 0.00 C+0 HETATM 25 C UNK 0 2.446 -5.072 3.079 0.00 0.00 C+0 HETATM 26 C UNK 0 2.905 -3.931 2.449 0.00 0.00 C+0 HETATM 27 C UNK 0 2.736 -0.288 -0.498 0.00 0.00 C+0 HETATM 28 O UNK 0 1.732 0.675 -0.475 0.00 0.00 O+0 HETATM 29 C UNK 0 4.053 0.222 -0.019 0.00 0.00 C+0 HETATM 30 C UNK 0 3.955 0.525 1.461 0.00 0.00 C+0 HETATM 31 C UNK 0 4.383 1.478 -0.734 0.00 0.00 C+0 HETATM 32 O UNK 0 3.616 1.900 -1.624 0.00 0.00 O+0 HETATM 33 N UNK 0 5.550 2.195 -0.419 0.00 0.00 N+0 HETATM 34 C UNK 0 5.880 3.424 -1.113 0.00 0.00 C+0 HETATM 35 C UNK 0 5.975 4.596 -0.168 0.00 0.00 C+0 HETATM 36 C UNK 0 6.117 5.853 -1.008 0.00 0.00 C+0 HETATM 37 C UNK 0 7.336 5.773 -1.869 0.00 0.00 C+0 HETATM 38 O UNK 0 7.775 6.830 -2.379 0.00 0.00 O+0 HETATM 39 N UNK 0 7.924 4.493 -2.055 0.00 0.00 N+0 HETATM 40 C UNK 0 7.158 3.323 -1.852 0.00 0.00 C+0 HETATM 41 O UNK 0 7.604 2.233 -2.316 0.00 0.00 O+0 HETATM 42 C UNK 0 -5.118 -0.583 0.771 0.00 0.00 C+0 HETATM 43 O UNK 0 -6.404 0.019 0.738 0.00 0.00 O+0 HETATM 44 C UNK 0 -4.685 -0.625 2.185 0.00 0.00 C+0 HETATM 45 C UNK 0 -5.750 -1.488 2.906 0.00 0.00 C+0 HETATM 46 C UNK 0 -4.698 0.691 2.917 0.00 0.00 C+0 HETATM 47 H UNK 0 -7.422 3.444 -1.333 0.00 0.00 H+0 HETATM 48 H UNK 0 -7.549 4.766 -0.097 0.00 0.00 H+0 HETATM 49 H UNK 0 -7.608 5.124 -1.827 0.00 0.00 H+0 HETATM 50 H UNK 0 -5.167 4.207 0.700 0.00 0.00 H+0 HETATM 51 H UNK 0 -3.897 4.335 -0.528 0.00 0.00 H+0 HETATM 52 H UNK 0 -3.673 1.935 0.928 0.00 0.00 H+0 HETATM 53 H UNK 0 -4.811 0.067 -1.194 0.00 0.00 H+0 HETATM 54 H UNK 0 -3.675 -3.248 -0.150 0.00 0.00 H+0 HETATM 55 H UNK 0 -2.978 -4.418 -1.833 0.00 0.00 H+0 HETATM 56 H UNK 0 -4.271 -3.570 -2.709 0.00 0.00 H+0 HETATM 57 H UNK 0 -2.108 -3.505 -3.828 0.00 0.00 H+0 HETATM 58 H UNK 0 -2.855 -1.914 -3.629 0.00 0.00 H+0 HETATM 59 H UNK 0 -0.790 -1.264 -2.689 0.00 0.00 H+0 HETATM 60 H UNK 0 -0.251 -3.005 -2.655 0.00 0.00 H+0 HETATM 61 H UNK 0 -1.434 -3.381 -0.632 0.00 0.00 H+0 HETATM 62 H UNK 0 1.302 -2.528 -1.425 0.00 0.00 H+0 HETATM 63 H UNK 0 1.931 -1.209 1.216 0.00 0.00 H+0 HETATM 64 H UNK 0 3.713 -2.842 -0.664 0.00 0.00 H+0 HETATM 65 H UNK 0 4.202 -2.193 0.906 0.00 0.00 H+0 HETATM 66 H UNK 0 2.235 -4.748 -0.704 0.00 0.00 H+0 HETATM 67 H UNK 0 1.405 -6.803 0.416 0.00 0.00 H+0 HETATM 68 H UNK 0 1.540 -7.015 2.861 0.00 0.00 H+0 HETATM 69 H UNK 0 2.500 -5.178 4.154 0.00 0.00 H+0 HETATM 70 H UNK 0 3.327 -3.129 3.044 0.00 0.00 H+0 HETATM 71 H UNK 0 2.845 -0.594 -1.586 0.00 0.00 H+0 HETATM 72 H UNK 0 1.985 1.362 0.214 0.00 0.00 H+0 HETATM 73 H UNK 0 4.893 -0.472 -0.235 0.00 0.00 H+0 HETATM 74 H UNK 0 4.240 1.600 1.649 0.00 0.00 H+0 HETATM 75 H UNK 0 4.605 -0.143 2.066 0.00 0.00 H+0 HETATM 76 H UNK 0 2.931 0.436 1.868 0.00 0.00 H+0 HETATM 77 H UNK 0 6.218 1.875 0.321 0.00 0.00 H+0 HETATM 78 H UNK 0 5.084 3.651 -1.881 0.00 0.00 H+0 HETATM 79 H UNK 0 6.863 4.451 0.477 0.00 0.00 H+0 HETATM 80 H UNK 0 5.083 4.732 0.468 0.00 0.00 H+0 HETATM 81 H UNK 0 6.199 6.708 -0.297 0.00 0.00 H+0 HETATM 82 H UNK 0 5.200 5.978 -1.594 0.00 0.00 H+0 HETATM 83 H UNK 0 8.930 4.452 -2.342 0.00 0.00 H+0 HETATM 84 H UNK 0 -5.336 -1.637 0.441 0.00 0.00 H+0 HETATM 85 H UNK 0 -6.763 -0.174 -0.162 0.00 0.00 H+0 HETATM 86 H UNK 0 -3.680 -1.068 2.344 0.00 0.00 H+0 HETATM 87 H UNK 0 -6.727 -1.090 2.575 0.00 0.00 H+0 HETATM 88 H UNK 0 -5.667 -2.516 2.490 0.00 0.00 H+0 HETATM 89 H UNK 0 -5.667 -1.421 3.990 0.00 0.00 H+0 HETATM 90 H UNK 0 -5.368 1.448 2.494 0.00 0.00 H+0 HETATM 91 H UNK 0 -5.066 0.481 3.971 0.00 0.00 H+0 HETATM 92 H UNK 0 -3.654 1.062 3.105 0.00 0.00 H+0 CONECT 1 2 47 48 49 CONECT 2 1 3 CONECT 3 2 4 50 51 CONECT 4 3 5 6 CONECT 5 4 CONECT 6 4 7 52 CONECT 7 6 8 42 53 CONECT 8 7 9 10 CONECT 9 8 CONECT 10 8 11 15 CONECT 11 10 12 54 CONECT 12 11 13 55 56 CONECT 13 12 14 57 58 CONECT 14 13 15 59 60 CONECT 15 14 16 10 61 CONECT 16 15 17 18 CONECT 17 16 CONECT 18 16 19 62 CONECT 19 18 20 27 63 CONECT 20 19 21 64 65 CONECT 21 20 22 26 CONECT 22 21 23 66 CONECT 23 22 24 67 CONECT 24 23 25 68 CONECT 25 24 26 69 CONECT 26 25 21 70 CONECT 27 19 28 29 71 CONECT 28 27 72 CONECT 29 27 30 31 73 CONECT 30 29 74 75 76 CONECT 31 29 32 33 CONECT 32 31 CONECT 33 31 34 77 CONECT 34 33 35 40 78 CONECT 35 34 36 79 80 CONECT 36 35 37 81 82 CONECT 37 36 38 39 CONECT 38 37 CONECT 39 37 40 83 CONECT 40 39 41 34 CONECT 41 40 CONECT 42 7 43 44 84 CONECT 43 42 85 CONECT 44 42 45 46 86 CONECT 45 44 87 88 89 CONECT 46 44 90 91 92 CONECT 47 1 CONECT 48 1 CONECT 49 1 CONECT 50 3 CONECT 51 3 CONECT 52 6 CONECT 53 7 CONECT 54 11 CONECT 55 12 CONECT 56 12 CONECT 57 13 CONECT 58 13 CONECT 59 14 CONECT 60 14 CONECT 61 15 CONECT 62 18 CONECT 63 19 CONECT 64 20 CONECT 65 20 CONECT 66 22 CONECT 67 23 CONECT 68 24 CONECT 69 25 CONECT 70 26 CONECT 71 27 CONECT 72 28 CONECT 73 29 CONECT 74 30 CONECT 75 30 CONECT 76 30 CONECT 77 33 CONECT 78 34 CONECT 79 35 CONECT 80 35 CONECT 81 36 CONECT 82 36 CONECT 83 39 CONECT 84 42 CONECT 85 43 CONECT 86 44 CONECT 87 45 CONECT 88 45 CONECT 89 45 CONECT 90 46 CONECT 91 46 CONECT 92 46 MASTER 0 0 0 0 0 0 0 0 92 0 188 0 END SMILES for NP0010184 (Padanamide B)[H]O[C@@]([H])([C@@]([H])(N([H])C(=O)C([H])([H])OC([H])([H])[H])C(=O)N1N([H])C([H])([H])C([H])([H])C([H])([H])[C@@]1([H])C(=O)N([H])[C@@]([H])(C([H])([H])C1=C([H])C([H])=C([H])C([H])=C1[H])[C@@]([H])(O[H])[C@@]([H])(C(=O)N([H])[C@]1([H])C(=O)N([H])C(=O)C([H])([H])C1([H])[H])C([H])([H])[H])C([H])(C([H])([H])[H])C([H])([H])[H] INCHI for NP0010184 (Padanamide B)InChI=1S/C31H46N6O9/c1-17(2)26(40)25(35-24(39)16-46-4)31(45)37-22(11-8-14-32-37)30(44)34-21(15-19-9-6-5-7-10-19)27(41)18(3)28(42)33-20-12-13-23(38)36-29(20)43/h5-7,9-10,17-18,20-22,25-27,32,40-41H,8,11-16H2,1-4H3,(H,33,42)(H,34,44)(H,35,39)(H,36,38,43)/t18-,20-,21-,22-,25+,26+,27-/m0/s1 3D Structure for NP0010184 (Padanamide B) | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Synonyms |
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Chemical Formula | C31H46N6O9 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Average Mass | 646.7420 Da | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Monoisotopic Mass | 646.33263 Da | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
IUPAC Name | (2S,3S,4S)-N-[(3S)-2,6-dioxopiperidin-3-yl]-3-hydroxy-4-{[(3S)-2-[(2R,3R)-3-hydroxy-2-(2-methoxyacetamido)-4-methylpentanoyl]-1,2-diazinan-3-yl]formamido}-2-methyl-5-phenylpentanamide | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Traditional Name | (2S,3S,4S)-N-[(3S)-2,6-dioxopiperidin-3-yl]-3-hydroxy-4-{[(3S)-2-[(2R,3R)-3-hydroxy-2-(2-methoxyacetamido)-4-methylpentanoyl]-1,2-diazinan-3-yl]formamido}-2-methyl-5-phenylpentanamide | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
CAS Registry Number | Not Available | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
SMILES | COCC(=O)N[C@H]([C@H](O)C(C)C)C(=O)N1NCCC[C@H]1C(=O)N[C@@H](CC1=CC=CC=C1)[C@@H](O)[C@H](C)C(=O)N[C@H]1CCC(=O)NC1=O | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
InChI Identifier | InChI=1S/C31H46N6O9/c1-17(2)26(40)25(35-24(39)16-46-4)31(45)37-22(11-8-14-32-37)30(44)34-21(15-19-9-6-5-7-10-19)27(41)18(3)28(42)33-20-12-13-23(38)36-29(20)43/h5-7,9-10,17-18,20-22,25-27,32,40-41H,8,11-16H2,1-4H3,(H,33,42)(H,34,44)(H,35,39)(H,36,38,43)/t18-,20-,21-,22-,25+,26+,27-/m0/s1 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
InChI Key | HVEJTNNFGWKHNS-GYNFZRGZSA-N | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Experimental Spectra | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Not Available | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Predicted Spectra | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Chemical Shift Submissions | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Not Available | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Species | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Species of Origin |
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Chemical Taxonomy | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Classification | Not classified | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Physical Properties | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
State | Not Available | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Experimental Properties |
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Predicted Properties |
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External Links | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
NPAtlas ID | NPA020068 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
HMDB ID | Not Available | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
DrugBank ID | Not Available | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Phenol Explorer Compound ID | Not Available | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
FoodDB ID | Not Available | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
KNApSAcK ID | Not Available | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Chemspider ID | 28185040 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
KEGG Compound ID | Not Available | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
BioCyc ID | Not Available | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
BiGG ID | Not Available | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Wikipedia Link | Not Available | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
METLIN ID | Not Available | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
PubChem Compound | 53483404 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
PDB ID | Not Available | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
ChEBI ID | Not Available | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Good Scents ID | Not Available | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
References | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
General References |
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