Np mrd loader

Record Information
Version1.0
Created at2020-12-09 00:31:53 UTC
Updated at2021-07-15 16:45:48 UTC
NP-MRD IDNP0003207
Secondary Accession NumbersNone
Natural Product Identification
Common NamePyrronamycin A
Provided ByNPAtlasNPAtlas Logo
Description Pyrronamycin A is found in Streptomyces sp. and Streptomyces sp. KY11768. It was first documented in 2000 (PMID: 10724011). Based on a literature review very few articles have been published on N-(6-amino-1-oxohex-4-en-2-yl)-3-[(4-{4-[(2-carbamimidamido-1-hydroxyethylidene)amino]-1H-pyrrole-2-amido}-1H-pyrrol-2-yl)formamido]-3-cyanopropanimidic acid.
Structure
Data?1624573758
Synonyms
ValueSource
N-(6-Amino-1-oxohex-4-en-2-yl)-3-[(4-{4-[(2-carbamimidamido-1-hydroxyethylidene)amino]-1H-pyrrole-2-amido}-1H-pyrrol-2-yl)formamido]-3-cyanopropanimidateGenerator
Chemical FormulaC23H29N11O5
Average Mass539.5570 Da
Monoisotopic Mass539.23531 Da
IUPAC NameN-(5-{[(1S)-2-{[(2S,4E)-6-amino-1-oxohex-4-en-2-yl]carbamoyl}-1-cyanoethyl]carbamoyl}-1H-pyrrol-3-yl)-4-{2-[(diaminomethylidene)amino]acetamido}-1H-pyrrole-2-carboxamide
Traditional NameN-(5-{[(1S)-2-{[(2S,4E)-6-amino-1-oxohex-4-en-2-yl]carbamoyl}-1-cyanoethyl]carbamoyl}-1H-pyrrol-3-yl)-4-{2-[(diaminomethylidene)amino]acetamido}-1H-pyrrole-2-carboxamide
CAS Registry NumberNot Available
SMILES
NC\C=C\CC(NC(=O)CC(NC(=O)C1=CC(NC(=O)C2=CC(NC(=O)CN=C(N)N)=CN2)=CN1)C#N)C=O
InChI Identifier
InChI=1S/C23H29N11O5/c24-4-2-1-3-13(12-35)31-19(36)7-14(8-25)33-21(38)18-6-16(10-29-18)34-22(39)17-5-15(9-28-17)32-20(37)11-30-23(26)27/h1-2,5-6,9-10,12-14,28-29H,3-4,7,11,24H2,(H,31,36)(H,32,37)(H,33,38)(H,34,39)(H4,26,27,30)/b2-1+
InChI KeyUNZNMERRZITKPA-OWOJBTEDSA-N
Experimental Spectra
Not Available
Predicted Spectra
Spectrum TypeDescriptionDepositor IDDepositor OrganizationDepositorDeposition DateView
1D NMR13C NMR Spectrum (1D, 25 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 100 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 252 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 1000 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 50 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 200 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 75 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 300 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 101 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 400 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 126 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 500 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 151 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 600 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 176 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 700 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 201 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 800 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 226 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 900 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
Chemical Shift Submissions
Not Available
Species
Species of Origin
Species NameSourceReference
Streptomyces sp.NPAtlas
Streptomyces sp. KY11768Bacteria
Chemical Taxonomy
ClassificationNot classified
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Predicted Properties
PropertyValueSource
logP-0.01ALOGPS
logP-3.8ChemAxon
logS-3.7ALOGPS
pKa (Strongest Acidic)11.86ChemAxon
pKa (Strongest Basic)10.62ChemAxon
Physiological Charge2ChemAxon
Hydrogen Acceptor Count10ChemAxon
Hydrogen Donor Count9ChemAxon
Polar Surface Area279.26 ŲChemAxon
Rotatable Bond Count14ChemAxon
Refractivity143.72 m³·mol⁻¹ChemAxon
Polarizability56 ųChemAxon
Number of Rings2ChemAxon
BioavailabilityNoChemAxon
Rule of FiveNoChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
NPAtlas IDNPA016037
HMDB IDNot Available
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FoodDB IDNot Available
KNApSAcK IDNot Available
Chemspider ID8090872
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound9915223
PDB IDNot Available
ChEBI IDNot Available
Good Scents IDNot Available
References
General References
  1. Asai A, Sakai Y, Ogawa H, Yamashita Y, Kakita S, Ochiai K, Ashizawa T, Mihara A, Mizukami T, Nakano H: Pyrronamycin A and B, novel antitumor antibiotics containing pyrrole-amide repeating unit, produced by Streptomyces sp. J Antibiot (Tokyo). 2000 Jan;53(1):66-9. doi: 10.7164/antibiotics.53.66. [PubMed:10724011 ]